RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CECR9P0C854 216 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 GAAP10253 952 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 CALCRP30988 508 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 CLK1P49759 484 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 SERPINB9P50453 376 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 FOXA1P55317 472 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 SKP2Q13309 424 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 TBRG1Q3YBR2 411 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 PDZK1Q5T2W1 519 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 TRIM46Q7Z4K8 759 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 POMGNT2Q8NAT1 580 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 METTL2AQ96IZ6 378 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 NAA11Q9BSU3 229 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 ACTRT3Q9BYD9 372 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 TPK1Q9H3S4 243 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 ACSS3Q9H6R3 686 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 MOV10Q9HCE1 1003 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 SLC52A3Q9NQ40 469 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 TREM2Q9NZC2 230 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 TMEM181Q9P2C4 612 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 CRNNQ9UBG3 495 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 FAF1Q9UNN5 650 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 EIF1BO60739 113 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 KRT33AO76009 404 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 KRT16P08779 473 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 ANPEPP15144 967 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 ATP5F1P24539 256 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 H3F3AP84243 136 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 HGFACQ04756 655 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 SLC9B1Q4ZJI4 515 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 C1QL2Q7Z5L3 287 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 SLC22A9Q8IVM8 553 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 OR1K1Q8NGR3 316 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 ZNF563Q8TA94 476 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 CCDC106Q9BWC9 280 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 NTN4Q9HB63 628 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 SIRT3Q9NTG7 399 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 TRAPPC4Q9Y296 219 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 PTGDR2Q9Y5Y4 395 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 KCNE3Q9Y6H6 103 aa13.66□□□□□ -0.22
PDLIM7-210ENST00000503827 NUP214P35658 2090 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 NPIPB8E9PQR5 432 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 CSTAP01040 98 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 AVPP01185 164 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 IGFBP1P08833 259 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 UBTFL6P0CB48 400 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 EFNA1P20827 205 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 SLC35A1P78382 337 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 MYBPC1Q00872 1141 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 POU3F1Q03052 451 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 SLC17A1Q14916 467 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 KIAA0040Q15053 153 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 ELFN2Q5R3F8 820 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 ZDHHC24Q6UX98 284 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 AAED1Q7RTV5 226 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 CARM1Q86X55 608 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 CDK20Q8IZL9 346 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 NANPQ8TBE9 248 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 TMEM45BQ96B21 275 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 L3HYPDHQ96EM0 354 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 OR11A1Q9GZK7 315 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 RAB17Q9H0T7 212 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 UNKLQ9H9P5 680 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 G6PC2Q9NQR9 355 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 MED29Q9NX70 200 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 PPIAL4AQ9Y536 164 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 VWFP04275 2813 aa13.65□□□□□ -0.22
PDLIM7-210ENST00000503827 ARPC4-TTLL3A0A0A6YYG9 625 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 OR6C65A6NJZ3 312 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 TRIM49D1C9J1S8 452 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 SKAP2O75563 359 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 CRCPO75575 148 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 IGLV1-44P01699 117 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 ACHEP22303 614 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 FPR2P25090 351 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 ASMTP46597 345 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 PRKAA2P54646 552 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 TP53BP2Q13625 1128 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 PDE7AQ13946 482 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 GPR68Q15743 365 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF311Q5JNZ3 666 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 GRINAQ7Z429 371 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 FAM169BQ8N8A8 192 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 DCAKDQ8WVC6 231 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 RDH5Q92781 318 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 AURKBQ96GD4 344 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 TSSK3Q96PN8 268 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF317Q96PQ6 595 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 CCT7Q99832 543 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 NMUR2Q9GZQ4 415 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 SEC61A2Q9H9S3 476 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 TMEM216Q9P0N5 145 aa13.64□□□□□ -0.23
PDLIM7-210ENST00000503827 A0A0G2JMP0 313 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 A0A0X1KG70 313 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 POM121CA8CG34 1229 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 NR5A2O00482 541 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 WNT9BO14905 357 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms