RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 FOXC1Q12948 553 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 SELENBP1Q13228 472 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 CLN3Q13286 438 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 MFAP5Q13361 173 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 BLMHQ13867 455 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF74Q16587 644 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 PGGHGQ32M88 737 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 PLPPR5Q32ZL2 321 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 TMEM201Q5SNT2 666 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 PRAMEF20Q5VT98 475 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 B3GNTL1Q67FW5 361 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 BICRALQ6AI39 1079 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 TIGD3Q6B0B8 471 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 C3orf33Q6P1S2 294 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 TMEM154Q6P9G4 183 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 MAMDC2Q7Z304 686 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 ADGRG3Q86Y34 549 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 KIF18BQ86Y91 864 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 ENTHD1Q8IYW4 607 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 FAM26EQ8N5C1 309 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 TSPAN14Q8NG11 270 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 SNIP1Q8TAD8 396 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 KCNE4Q8WWG9 221 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 FAM173AQ9BQD7 235 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 ADNPQ9H2P0 1102 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 OR52D1Q9H346 318 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 FN3KQ9H479 309 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 VCX3AQ9NNX9 186 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 C20orf141Q9NUB4 165 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 PLCXD1Q9NUJ7 323 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 B4GALT7Q9UBV7 327 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 RNF6Q9Y252 685 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 KLF13Q9Y2Y9 288 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 SLC6A5Q9Y345 797 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 MSRB2Q9Y3D2 182 aa7.38□□□□□ -1.23
TOPBP1-202ENST00000503338 HEATR5AQ86XA9 2040 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 EXPH5Q8NEV8 1989 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 IGKV1D-42A0A075B6H8 117 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 TMEM72A0PK05 275 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 IRGMA1A4Y4 181 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 ARGFXA6NJG6 315 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 SLC1A7O00341 560 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 IMPA2O14732 288 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 NPIPB7O75200 414 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 TRIM3O75382 744 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 NTN1O95631 604 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 CH25HO95992 272 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 CLPTM1O96005 669 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 IFNGP01579 166 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 ASAH2BP0C7U1 165 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 GABRB1P18505 474 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 CRHBPP24387 322 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 EEF1B2P24534 225 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 MST1P26927 711 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 DPP4P27487 766 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 GTF2E2P29084 291 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 SRD5A2P31213 254 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 LSM11P83369 360 aaKnown RBP eCLIP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 TUBA3CQ13748 450 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 TOMM34Q15785 309 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 SNAPC1Q16533 368 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 OCLNQ16625 522 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 C1orf140Q5VVS0 124 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 OR5M10Q6IEU7 315 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 ARHGAP11AQ6P4F7 1023 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 TUBA3EQ6PEY2 450 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 DPY19L2P2Q6ZN68 376 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 SLC46A3Q7Z3Q1 461 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 VASH2Q86V25 355 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 CCDC71Q8IV32 467 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 GTPBP8Q8N3Z3 284 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 LNX2Q8N448 690 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 C10orf53Q8N6V4 93 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 SCAIQ8N9R8 606 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 WDSUB1Q8N9V3 476 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 MFSD8Q8NHS3 518 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 HAS2Q92819 552 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 RFKQ969G6 155 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 MYDGFQ969H8 173 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 GPX7Q96SL4 187 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 PIGQQ9BRB3 760 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 TAPBPLQ9BX59 468 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 ASPNQ9BXN1 380 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 UBQLN3Q9H347 655 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 EGLN3Q9H6Z9 239 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 RASSF1Q9NS23 344 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 TVP23BQ9NYZ1 205 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 CNOT2Q9NZN8 540 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 DKK4Q9UBT3 224 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 DKKL1Q9UK85 242 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 HIF3AQ9Y2N7 669 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 HDGFL3Q9Y3E1 203 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 RPL36Q9Y3U8 105 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 CEP250Q9BV73 2442 aa7.37□□□□□ -1.23
TOPBP1-202ENST00000503338 C2orf72A6NCS6 295 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 OR5H15A6NDH6 313 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 EFCAB10A6NFE3 127 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 RIIAD1A6NNX1 92 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 KLRC4-KLRK1H3BQV0 150 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 BHLHE40O14503 412 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms