RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 AGPAT2O15120 278 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 SLCO2B1O94956 709 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 IFNGR1P15260 489 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 CASP6P55212 293 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 CHAF1BQ13112 559 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 BPHLQ86WA6 291 aaPredicted RBP16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 RBM45Q8IUH3 476 aaKnown RBP16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 C12orf76Q8N812 135 aaPredicted RBP16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 STK35Q8TDR2 534 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 MYLIPQ8WY64 445 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 RELTQ969Z4 430 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 ATF6BQ99941 703 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 MICU1Q9BPX6 476 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 QRSL1Q9H0R6 528 aaKnown RBP16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 NLRC3Q7RTR2 1065 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 CPXM2Q8N436 756 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 OR14K1Q8NGZ2 314 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 CLCC1Q96S66 551 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 FAM171A2A8MVW0 826 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 ADAMTS4O75173 837 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 ELAVL3Q14576 367 aaKnown RBP16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 BPIFB2Q8N4F0 458 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 RASGEF1AQ8N9B8 481 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 OR6M1Q8NGM8 313 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 MSLNLQ96KJ4 702 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 C10orf90Q96M02 699 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 ZNF649Q9BS31 505 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 UBQLN3Q9H347 655 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 HRH4Q9H3N8 390 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 ACOD1A6NK06 481 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 ZNF726A6NNF4 738 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 GPR171O14626 319 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 KLF8O95600 359 aaPredicted RBP16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 HIST1H1TP22492 207 aaPredicted RBP16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 CRYBB2P43320 205 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 DGCR2P98153 550 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 FAM209AQ5JX71 171 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 IL22RA1Q8N6P7 574 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 OR5H2Q8NGV7 314 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 LMX1AQ8TE12 382 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 ZNF578Q96N58 590 aaPredicted RBP16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 GPR34Q9UPC5 381 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 SSX5O60225 188 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 SLC6A11P48066 632 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 RAB5CP51148 216 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 TCTN3Q6NUS6 607 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 RNF141Q8WVD5 230 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 SLC25A32Q9H2D1 315 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 SERINC1Q9NRX5 453 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 KLF15Q9UIH9 416 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 CDC123O75794 336 aaPredicted RBP16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 ZP3P21754 424 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 SLC6A9P48067 706 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 CLDN12P56749 244 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 HERV-K104P61576 105 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 SSX1Q16384 188 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 RNF165Q6ZSG1 346 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 PRSS45Q7RTY3 260 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 GPAT4Q86UL3 456 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 SLC25A19Q9HC21 320 aa16.03■□□□□ 0.16
HMGXB3-201ENST00000502717 SDK1Q7Z5N4 2213 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 NR2C1P13056 603 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 CDK2P24941 298 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 PRKAR1BP31321 381 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 FGF9P31371 208 aaPredicted RBP16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 SLC14A1Q13336 389 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 ZER1Q7Z7L7 766 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 PRSS58Q8IYP2 241 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 ESX1Q8N693 406 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 GATSQ8NAP1 163 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 OR13C2Q8NGS9 318 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 APH1BQ8WW43 257 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 MYADMQ96S97 322 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 MARVELD1Q9BSK0 173 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 TESQ9UGI8 421 aaKnown RBP16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 OR1A2Q9Y585 309 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 GFYI3L273 518 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 HEPHL1Q6MZM0 1159 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 C17orf107Q6ZR85 190 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 OVCH1Q7RTY7 1134 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 TM4SF18Q96CE8 201 aa16.02■□□□□ 0.16
HMGXB3-201ENST00000502717 KHNYNO15037 678 aaKnown RBP16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 PMS2P2O95744 297 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 FOXK2Q01167 660 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 DCST2Q5T1A1 773 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 CYHR1Q6ZMK1 362 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 DOK4Q8TEW6 326 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 OR14A2Q96R54 314 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 FAM83CQ9BQN1 747 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 MCCC2Q9HCC0 563 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 PIAS3Q9Y6X2 628 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 XIRP1Q702N8 1843 aaKnown RBP16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 SOD1P00441 154 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 OR8U9P0C7N5 309 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 PTGER1P34995 402 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 HYAL2Q12891 473 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 BAMBIQ13145 260 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 GBX1Q14549 363 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 ALG10Q5BKT4 473 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms