RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 SYT9Q86SS6 491 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 TPRA1Q86W33 373 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 GPR135Q8IZ08 494 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 TCTE3Q8IZS6 198 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 GHDCQ8N2G8 530 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 RFT1Q96AA3 541 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 PELI1Q96FA3 418 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 GFM1Q96RP9 751 aaKnown RBP9.05□□□□□ -0.96
CLIP1-204ENST00000501271 THAP7Q9BT49 309 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-204ENST00000501271 EVA1AQ9H8M9 152 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-204ENST00000501271 LRIT1Q9P2V4 623 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 MMP17Q9ULZ9 603 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 IER3IP1Q9Y5U9 82 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 A0A0B4J203 849 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 OR6C70A6NIJ9 312 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 SLC43A1O75387 559 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 NDUFB2O95178 105 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 GUSBP08236 651 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 THEGLP0DJG4 465 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 CT45A8P0DMV1 189 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 CT45A9P0DMV2 189 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 PITPNBP48739 271 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 EFR3AQ14156 821 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ZNF267Q14586 743 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-204ENST00000501271 PRTGQ2VWP7 1150 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 CT45A2Q5DJT8 189 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ARMC6Q6NXE6 501 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 MCATQ8IVS2 390 aaKnown RBP9.05□□□□□ -0.96
CLIP1-204ENST00000501271 OR5H6Q8NGV6 325 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 LILRB4Q8NHJ6 448 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ZPLD1Q8TCW7 415 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ZDHHC1Q8WTX9 485 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 RBM18Q96H35 190 aaKnown RBP9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ABHD1Q96SE0 405 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 CNN2Q99439 309 aaKnown RBP9.05□□□□□ -0.96
CLIP1-204ENST00000501271 GALNT9Q9HCQ5 603 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 MCUBQ9NWR8 336 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 MSRAQ9UJ68 235 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 KLHL21Q9UJP4 597 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ICAM5Q9UMF0 924 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 SPEGQ15772 3267 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 SHISA7A6NL88 538 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 EEF1E1O43324 174 aaKnown RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 ORC5O43913 435 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 PRKNO60260 465 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 RNH1P13489 461 aaKnown RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CTSEP14091 401 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 RAB3BP20337 219 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 MAOAP21397 527 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 SLC6A1P30531 599 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 BTCP35070 178 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 GPR3P46089 330 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 GDI2P50395 445 aaKnown RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 PGDP52209 483 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 MAZP56270 477 aaKnown RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CDK5R1Q15078 307 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 ZNF550Q7Z398 422 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 SLC43A2Q8N370 569 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 OR4D9Q8NGE8 314 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 OR4C3Q8NH37 302 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 C16orf52Q8NHV5 167 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CREB3L1Q96BA8 519 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 SMIM19Q96E16 107 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 SGTBQ96EQ0 304 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 TOE1Q96GM8 510 aaKnown RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 MKKSQ9NPJ1 570 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 RPS6KB2Q9UBS0 482 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CLEC4AQ9UMR7 237 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CYP8B1Q9UNU6 501 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 ERVK-19Q9WJR5 959 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 NOX1Q9Y5S8 564 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 INMT-MINDY4F8WBC2 141 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 SCO2O43819 266 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 PRAMEF2O60811 474 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CTNSO60931 367 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 FZD7O75084 574 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 TRIM3O75382 744 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CSTAP01040 98 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 ATF1P18846 271 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 SRP9P49458 86 aaKnown RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 ATP12AP54707 1039 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 RRAS2P62070 204 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 RPS11P62280 158 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 IGLV3-21P80748 117 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CCINQ13939 588 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 GGTLC2Q14390 218 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 PLA1AQ53H76 456 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 YIF1BQ5BJH7 314 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 KIAA0895LQ68EN5 471 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 LYPD4Q6UWN0 246 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 SLC35F2Q8IXU6 374 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 MS4A15Q8N5U1 240 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 METTL27Q8N6F8 245 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-204ENST00000501271 BCORP1Q8N888 145 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 TEX19Q8NA77 164 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 THAP4Q8WY91 577 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 DGAT2Q96PD7 388 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 LMF1Q96S06 567 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 NMNAT3Q96T66 252 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms