RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	OR10A4	Q9H209	315 aa		9.38	□□□□□ -0.91
FXR1-222	ENST00000498658	BCO1	Q9HAY6	547 aa		9.38	□□□□□ -0.91
FXR1-222	ENST00000498658	SAR1A	Q9NR31	198 aa		9.38	□□□□□ -0.91
FXR1-222	ENST00000498658	RASSF1	Q9NS23	344 aa		9.38	□□□□□ -0.91
FXR1-222	ENST00000498658	TMEM181	Q9P2C4	612 aa		9.38	□□□□□ -0.91
FXR1-222	ENST00000498658	OSGIN1	Q9UJX0	560 aa		9.38	□□□□□ -0.91
FXR1-222	ENST00000498658	CLEC4A	Q9UMR7	237 aa		9.38	□□□□□ -0.91
FXR1-222	ENST00000498658	TMED7	Q9Y3B3	224 aa		9.38	□□□□□ -0.91
FXR1-222	ENST00000498658	AP3D1	O14617	1153 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	GPR171	O14626	319 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	ADAM11	O75078	769 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	CNOT4	O95628	575 aa	Known RBP	9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	FES	P07332	822 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	GKN3P	P0CG01	181 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	KLF10	Q13118	480 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	SNTB1	Q13884	538 aa	Known RBP	9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	P2RY6	Q15077	328 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	INTS11	Q5TA45	600 aa	Known RBP	9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	DHRS4L2	Q6PKH6	230 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	RETREG3	Q86VR2	466 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	ARMC8	Q8IUR7	673 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	TUSC5	Q8IXB3	177 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	CLIP4	Q8N3C7	705 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	CADM2	Q8N3J6	435 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	OR8J3	Q8NGG0	315 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	LINC01560	Q8TB33	94 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	PIGX	Q8TBF5	258 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	RASSF5	Q8WWW0	418 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	ZNF317	Q96PQ6	595 aa	Predicted RBP	9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	PSD2	Q9BQI7	771 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	MED18	Q9BUE0	208 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	POTEKP	Q9BYX7	375 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	CLEC4M	Q9H2X3	399 aa	Predicted RBP	9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	KAT8	Q9H7Z6	458 aa	Known RBP	9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	C12orf10	Q9HB07	376 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	GID8	Q9NWU2	228 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	GPR52	Q9Y2T5	361 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	TESMIN	Q9Y4I5	508 aa		9.37	□□□□□ -0.91
FXR1-222	ENST00000498658	MPDZ	O75970	2070 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	IGKV3D-15	A0A087WSY6	115 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658		A8MVM7	634 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	SMAD9	O15198	467 aa	Known RBP	9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	GPI	P06744	558 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	C8B	P07358	591 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	PNMT	P11086	282 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	PSMB1	P20618	241 aa	Known RBP	9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	IDUA	P35475	653 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	OR2B6	P58173	313 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	MTPN	P58546	118 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	NCALD	P61601	193 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	ADRM1	Q16186	407 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	EXOC3L2	Q2M3D2	409 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	C5orf46	Q6UWT4	87 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	SSX8	Q7RTT4	187 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	GALNT5	Q7Z7M9	940 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	PATL1	Q86TB9	770 aa	Known RBP	9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	CDH24	Q86UP0	819 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	LSMEM1	Q8N8F7	131 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	STEAP2	Q8NFT2	490 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	DNAJA4	Q8WW22	397 aa	Predicted RBP	9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	LRRC58	Q96CX6	371 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	ECSIT	Q9BQ95	431 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	GPATCH1	Q9BRR8	931 aa	Known RBP	9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	TAPBPL	Q9BX59	468 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	TRIM2	Q9C040	744 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	KLHL4	Q9C0H6	718 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	NSRP1	Q9H0G5	558 aa	Known RBP	9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	IKZF5	Q9H5V7	419 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	C12orf49	Q9H741	205 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	SELENON	Q9NZV5	590 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	RPS6KB2	Q9UBS0	482 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	TES	Q9UGI8	421 aa	Known RBP	9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	AP3M1	Q9Y2T2	418 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	CHST2	Q9Y4C5	530 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	CAPN7	Q9Y6W3	813 aa		9.36	□□□□□ -0.91
FXR1-222	ENST00000498658	IGHV3-15	A0A0B4J1V0	119 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	TMEM72	A0PK05	275 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	FBP2	O00757	339 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	MRAS	O14807	208 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	CD1E	P15812	388 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	CCNA2	P20248	432 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	PCGF2	P35227	344 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	OR3A2	P47893	321 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	SLC16A1	P53985	500 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	PCBP3	P57721	371 aa	Known RBP	9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	H3F3A	P84243	136 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	FAM91A1	Q658Y4	838 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	ABLIM2	Q6H8Q1	611 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	NANOGP8	Q6NSW7	305 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	CGB2	Q6NT52	195 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	ERICH5	Q6P6B1	374 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	ULK3	Q6PHR2	472 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	PAQR6	Q6TCH4	344 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	TFAP2E	Q6VUC0	442 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	NET1	Q7Z628	596 aa	Predicted RBP	9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	RANBP3L	Q86VV4	465 aa	Predicted RBP	9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	ZNF100	Q8IYN0	542 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	C10orf111	Q8N326	155 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	OR52E4	Q8NGH9	312 aa		9.35	□□□□□ -0.91
FXR1-222	ENST00000498658	OR10A6	Q8NH74	314 aa		9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms