RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 C11orf98E9PRG8 122 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 UPK1AO00322 258 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SULT1C2O00338 296 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SCAMP2O15127 329 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 XRCC2O43543 280 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GPR137BO60478 399 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 COQ9O75208 318 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 BCAS2O75934 225 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 VAMP5O95183 116 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 HLA-HP01893 362 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PVRP15151 417 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 STMN1P16949 149 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FEN1P39748 380 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 TTPAP49638 278 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NT5C2P49902 561 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PDLIM4P50479 330 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CASP5P51878 434 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PNLIPRP1P54315 467 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SNU13P55769 128 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ACTR2P61160 394 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GPR50Q13585 617 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 BAATQ14032 418 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 VEZF1Q14119 521 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ELAVL3Q14576 367 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 LRRC26Q2I0M4 334 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MARCH8Q5T0T0 291 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CYB5D1Q6P9G0 228 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RFX8Q6ZV50 586 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TRABD2AQ86V40 505 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 HORMAD1Q86X24 394 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TGIF2LXQ8IUE1 241 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF397Q8NF99 534 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 SPTSSBQ8NFR3 76 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR52M1Q8NGK5 317 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GPR148Q8TDV2 347 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TBC1D20Q96BZ9 403 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NSUN4Q96CB9 384 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 SUCLG2Q96I99 432 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FAM111AQ96PZ2 611 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NMNAT3Q96T66 252 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 C17orf62Q9BQA9 187 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 STRA6Q9BX79 667 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PITHD1Q9GZP4 211 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 TLE6Q9H808 572 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ACTR8Q9H981 624 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 XPNPEP1Q9NQW7 623 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 YAE1D1Q9NRH1 226 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SNTG1Q9NSN8 517 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ATAD3AQ9NVI7 634 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 WSB2Q9NYS7 404 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ACTR10Q9NZ32 417 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GNG13Q9P2W3 67 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CRNNQ9UBG3 495 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 SLC45A1Q9Y2W3 748 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FAM32AQ9Y421 112 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 TMEM184BQ9Y519 407 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 PLXNA1Q9UIW2 1896 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TRAV30A0A087WSZ9 112 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 A0A0G2JLL6 359 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 A0A1W2PRS3 328 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PGRMC1O00264 195 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 RNASET2O00584 256 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 PDCD5O14737 125 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ACOX3O15254 700 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SAP30O75446 220 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ATP5LO75964 103 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TNFRSF6BO95407 300 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NGFRP08138 427 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CTSGP08311 255 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ANXA4P09525 319 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 P0C880 135 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PF4V1P10720 104 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ITGA3P26006 1051 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CA8P35219 290 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SFTPDP35247 375 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SPAM1P38567 509 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MCAMP43121 646 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 STT3AP46977 705 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CCR3P51677 355 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 UBXN1Q04323 297 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NFATC3Q12968 1075 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 HLXQ14774 488 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 PCOLCEQ15113 449 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 GUSBP1Q15486 140 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SPA17Q15506 151 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLC5A9Q2M3M2 681 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ACCSLQ4AC99 568 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 AFMIDQ63HM1 303 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 STUMQ69YW2 141 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TWF2Q6IBS0 349 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 UGT3A1Q6NUS8 523 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 RABEPKQ7Z6M1 372 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ASPGQ86U10 573 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ANKRD46Q86W74 232 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 HOMER1Q86YM7 354 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PEX5LQ8IYB4 626 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 LINC00311Q8N616 119 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZNF676Q8N7Q3 588 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FRMD1Q8N878 549 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TP53I13Q8NBR0 393 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms