RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ELF3P78545 371 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-227ENST00000498056 C19orf57Q0VDD7 668 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 PPP1R8Q12972 351 aaKnown RBP12.22□□□□□ -0.45
CPNE1-227ENST00000498056 EXOC3L2Q2M3D2 409 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 TMEM176BQ3YBM2 270 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-227ENST00000498056 KRTCAP3Q53RY4 240 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 NHSL2Q5HYW2 709 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF730Q6ZMV8 503 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 GGNQ86UU5 652 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 CD163Q86VB7 1156 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 C10orf67Q8IYJ2 551 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 PFN4Q8NHR9 129 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 TMEM239Q8WW34 195 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 DUS3LQ96G46 650 aaKnown RBP12.22□□□□□ -0.45
CPNE1-227ENST00000498056 DHRS1Q96LJ7 313 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 PRSS27Q9BQR3 290 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 ANKRD19PQ9H560 264 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 S100A14Q9HCY8 104 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 ARMC1Q9NVT9 282 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 TMCC3Q9ULS5 477 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 LYVE1Q9Y5Y7 322 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 A0A1W2PRQ8 180 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 OR14I1A6ND48 311 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 ENO4A6NNW6 628 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 H3BNX3 289 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 BCKDKO14874 412 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF208O43345 1280 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 EFNA2O43921 213 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 LDLRP01130 860 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF708P17019 499 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 FASP25445 335 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 GTF2E2P29084 291 aaKnown RBP12.21□□□□□ -0.45
CPNE1-227ENST00000498056 PTGS2P35354 604 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 IDUAP35475 653 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 RBM34P42696 430 aaKnown RBP12.21□□□□□ -0.45
CPNE1-227ENST00000498056 RPS5P46782 204 aaKnown RBP12.21□□□□□ -0.45
CPNE1-227ENST00000498056 EIF1AXP47813 144 aaKnown RBP12.21□□□□□ -0.45
CPNE1-227ENST00000498056 CLDN18P56856 261 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 RBPJQ06330 500 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 DGCR6Q14129 220 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 LAPTM4AQ15012 233 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 WLSQ5T9L3 541 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 C1orf140Q5VVS0 124 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 HBMQ6B0K9 141 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 VASNQ6EMK4 673 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 RRM2BQ7LG56 351 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 C10orf53Q8N6V4 93 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 OR5M9Q8NGP3 310 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 STK35Q8TDR2 534 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 ACOT11Q8WXI4 607 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-227ENST00000498056 LRTOMTQ8WZ04 291 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 KTI12Q96EK9 354 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-227ENST00000498056 ARL5BQ96KC2 179 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 ALPK1Q96QP1 1244 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 EPYCQ99645 322 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 TMEM43Q9BTV4 400 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 COQ10BQ9H8M1 238 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 DNAJB9Q9UBS3 223 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 RALYQ9UKM9 306 aaKnown RBP12.21□□□□□ -0.45
CPNE1-227ENST00000498056 PRDM4Q9UKN5 801 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 RRP15Q9Y3B9 282 aaKnown RBP12.21□□□□□ -0.45
CPNE1-227ENST00000498056 MED31Q9Y3C7 131 aa12.21□□□□□ -0.45
CPNE1-227ENST00000498056 CLOCKO15516 846 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 BAG2O95816 211 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 IFI30P13284 250 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 CBLP22681 906 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 IST1P53990 364 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 RPS3AP61247 264 aaKnown RBP12.2□□□□□ -0.46
CPNE1-227ENST00000498056 TLE1Q04724 770 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 EGR4Q05215 589 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 MYBPHQ13203 477 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 RCN1Q15293 331 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 OR7A5Q15622 319 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 ATP6AP1Q15904 470 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 CTU2Q2VPK5 515 aaKnown RBP12.2□□□□□ -0.46
CPNE1-227ENST00000498056 PDSS1Q5T2R2 415 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 PODNL1Q6PEZ8 512 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 C5orf46Q6UWT4 87 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 ESPNLQ6ZVH7 1005 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 CHMP1BQ7LBR1 199 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 FGD2Q7Z6J4 655 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 AMIGO2Q86SJ2 522 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 MEX3DQ86XN8 651 aaKnown RBP12.2□□□□□ -0.46
CPNE1-227ENST00000498056 NRMQ8IXM6 262 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 PM20D2Q8IYS1 436 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 OR4K5Q8NGD3 323 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 OR9Q2Q8NGE9 314 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 OR10D3Q8NH80 312 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 OR2V1Q8NHB1 315 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 SLC7A13Q8TCU3 470 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 WDYHV1Q96HA8 205 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 HS6ST2Q96MM7 605 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 TIMP4Q99727 224 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 BARD1Q99728 777 aaKnown RBP12.2□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF426Q9BUY5 554 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 TAPBPLQ9BX59 468 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 SEMA6AQ9H2E6 1030 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 KRCC1Q9NPI7 259 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-227ENST00000498056 PNPLA3Q9NST1 481 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 ALKBH4Q9NXW9 302 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms