RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 PRAF2O60831 178 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 HUS1O60921 280 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 E2F6O75461 281 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 PIAS1O75925 651 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 OR6B1O95007 311 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 ATP6V1B1P15313 513 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 KCNE1P15382 129 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 GOT1P17174 413 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 ARF4P18085 180 aaPredicted RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 IL1RNP18510 177 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 CCNA2P20248 432 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 IMPDH1P20839 514 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 CD9P21926 228 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 HTR1EP28566 365 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SERPINB10P48595 397 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 GMPSP49915 693 aaPredicted RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 HLCSP50747 726 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 NAGLUP54802 743 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 HMGCS2P54868 508 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 C21orf59P57076 290 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SP4Q02446 784 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 RIPPLY1Q0D2K3 151 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 ZNF273Q14593 569 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 ZNF846Q147U1 533 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 PPA1Q15181 289 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 ATP6AP1Q15904 470 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 NDUFA5Q16718 116 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 PRR30Q53SZ7 412 aaPredicted RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 XKR4Q5GH76 650 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 LRRC73Q5JTD7 316 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 BRMS1LQ5PSV4 323 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 C6orf52Q5T4I8 152 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 RSBN1Q5VWQ0 802 aaPredicted RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 TTC23Q5W5X9 447 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 IYDQ6PHW0 289 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 REG3GQ6UW15 175 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 ALKAL1Q6UXT8 129 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 RNF165Q6ZSG1 346 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 Q6ZVQ6 151 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 TRMT11Q7Z4G4 463 aaKnown RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 ACOT1Q86TX2 421 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 FAM9CQ8IZT9 166 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 CENPLQ8N0S6 344 aaPredicted RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 CLYBLQ8N0X4 340 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SIX6OS1Q8N1H7 587 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SVOPLQ8N434 492 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 DHRSXQ8N5I4 330 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SNX31Q8N9S9 440 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 OR6J1Q8NGC5 347 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 OR52K1Q8NGK4 314 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 UBA3Q8TBC4 463 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SPPL2BQ8TCT7 592 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 PPWD1Q96BP3 646 aaKnown RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 ISOC1Q96CN7 298 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 C19orf60Q96EN9 201 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 AURKBQ96GD4 344 aaPredicted RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SH3GL1Q99961 368 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 C19orf43Q9BQ61 176 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 TBL1YQ9BQ87 522 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 KATNB1Q9BVA0 655 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 COQ10BQ9H8M1 238 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 CXorf21Q9HAI6 301 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 TNFRSF19Q9NS68 423 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SMPD3Q9NY59 655 aaPredicted RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 HMGXB4Q9UGU5 601 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 SATB2Q9UPW6 733 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 RUVBL2Q9Y230 463 aaKnown RBP3.17□□□□□ -1.9
TRIM4-205ENST00000496896 RNF11Q9Y3C5 154 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 AUP1Q9Y679 476 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 AP1M2Q9Y6Q5 423 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 KIF25-AS1Q9Y6Z4 181 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 HSPE1-MOB4S4R3N1 261 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 MGAMO43451 1857 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 PAPPA2Q9BXP8 1791 aa3.17□□□□□ -1.9
TRIM4-205ENST00000496896 GON4LQ3T8J9 2241 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 RNF103-CHMP3A0A140T963 221 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 A0A1W2PP18 115 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ISPDA4D126 451 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 PRORSD1PA6NEY8 169 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 SAGE2PA6NJ88 616 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ANXA2P2A6NMY6 339 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GOLGA8TH3BQL2 631 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 H3BSA7 217 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 SLC22A1O15245 554 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CLOCKO15516 846 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CFLARO15519 480 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 B4GALT5O43286 388 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GMNNO75496 209 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 EEDO75530 441 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GRAP2O75791 330 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CLPXO76031 633 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 WISP3O95389 354 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 EPOP01588 193 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 IGHG1P01857 330 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 MT-ND2P03891 347 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 LGALS2P05162 132 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CHRNGP07510 517 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CCDC159P0C7I6 412 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 OCM2P0CE71 109 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms