RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ATP8B3O60423 1300 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 IGKV1D-8A0A087WSZ0 117 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 A0A096LNJ9 63 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 RS1O15537 224 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 CLDN3O15551 220 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 H2BFMP0C1H6 154 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 ICAM2P13598 275 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 CRISP2P16562 243 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 POLR2EP19388 210 aaKnown RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 YWHABP31946 246 aaKnown RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 LONP1P36776 959 aaKnown RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 DAP3P51398 398 aaKnown RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 KPNA2P52292 529 aaKnown RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 AP3M2P53677 418 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 HSD17B7P56937 341 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 ZNF763Q0D2J5 394 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 MXD4Q14582 209 aaPredicted RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 C11orf71Q6IPW1 123 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 TMIGD1Q6UXZ0 262 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 GDPD3Q7L5L3 318 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 SAXO1Q8IYX7 474 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 FTMTQ8N4E7 242 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 ZNF561Q8N587 486 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 DUSP18Q8NEJ0 188 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 NDRG1Q92597 394 aaKnown RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 ARPC1AQ92747 370 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 C16orf45Q96MC5 204 aaPredicted RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 HDHD3Q9BSH5 251 aaPredicted RBP2.19□□□□□ -2.06
CD46-218ENST00000496723 DPH5Q9H2P9 285 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 NECAP2Q9NVZ3 263 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 AATFQ9NY61 560 aaKnown RBP eCLIP2.19□□□□□ -2.06
CD46-218ENST00000496723 TBK1Q9UHD2 729 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 AURKCQ9UQB9 309 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 TRAF3IP3Q9Y228 551 aa2.19□□□□□ -2.06
CD46-218ENST00000496723 MAP3K15Q6ZN16 1313 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 SH3TC1Q8TE82 1336 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 IGHV1OR21-1A0A087WYE8 117 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 A0A087WZY1 265 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 A0A1B0GUS0 222 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 A0A1W2PNV4 684 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 E9PBE3 544 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 LAD1O00515 517 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 OR1F1O43749 312 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 MED6O75586 246 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 LRATO95237 230 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 CALCBP10092 127 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 CXCR2P25025 360 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 HTR2AP28223 471 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 SHMT2P34897 504 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 CD86P42081 329 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 ACADVLP49748 655 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 RIPK1Q13546 671 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 CCDC57Q2TAC2 916 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 TMEM41BQ5BJD5 291 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 GPRC6AQ5T6X5 926 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 OR52W1Q6IF63 320 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 AFTPHQ6ULP2 937 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 LRRC31Q6UY01 552 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 ZNF571Q7Z3V5 609 aaPredicted RBP2.18□□□□□ -2.06
CD46-218ENST00000496723 RDH10Q8IZV5 341 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 CENPLQ8N0S6 344 aaPredicted RBP2.18□□□□□ -2.06
CD46-218ENST00000496723 LRRC43Q8N309 656 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 DHRSXQ8N5I4 330 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 STXBP6Q8NFX7 210 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 OR6C4Q8NGE1 309 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 KIR2DL5BQ8NHK3 375 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 TBC1D31Q96DN5 1066 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 ZNF670Q9BS34 389 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 NAT9Q9BTE0 207 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 SCRT1Q9BWW7 348 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 POLR1EQ9GZS1 481 aaKnown RBP2.18□□□□□ -2.06
CD46-218ENST00000496723 MEAF6Q9HAF1 191 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 NTN4Q9HB63 628 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 EML4Q9HC35 981 aaKnown RBP2.18□□□□□ -2.06
CD46-218ENST00000496723 SMPD3Q9NY59 655 aaPredicted RBP2.18□□□□□ -2.06
CD46-218ENST00000496723 RBAKQ9NYW8 714 aaPredicted RBP2.18□□□□□ -2.06
CD46-218ENST00000496723 STOX2Q9P2F5 926 aaPredicted RBP2.18□□□□□ -2.06
CD46-218ENST00000496723 TBX21Q9UL17 535 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 MFHAS1Q9Y4C4 1052 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 U3KQV3 271 aa2.18□□□□□ -2.06
CD46-218ENST00000496723 IGLV4-60A0A075B6I1 120 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 A0A1W2PQ67 120 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 RGSL1A5PLK6 1076 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 LRCOL1A6NCL2 159 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 C11orf94C9JXX5 98 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 NPIPA7E9PJI5 369 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 DCTN6O00399 190 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 CXCL13O43927 109 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 NEBLO76041 1014 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 LGALS2P05162 132 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 PNMA6AP0CW24 399 aaPredicted RBP2.17□□□□□ -2.06
CD46-218ENST00000496723 NPIPA8P0DM63 369 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 DESP17661 470 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 NT5EP21589 574 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 HOXA9P31269 272 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 PTGDSP41222 190 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 KIR2DS4P43632 304 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 RPS9P46781 194 aaKnown RBP2.17□□□□□ -2.06
CD46-218ENST00000496723 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 ACTA1P68133 377 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms