RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 EGR4Q05215 589 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 SEC23BQ15437 767 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 EXOC3L2Q2M3D2 409 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 DCST1Q5T197 706 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 ARHGAP11AQ6P4F7 1023 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 ZNF730Q6ZMV8 503 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 STK35Q8TDR2 534 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 SMPDL3BQ92485 455 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 DDIT4LQ96D03 193 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 BDH2Q9BUT1 245 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 SLC19A3Q9BZV2 496 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 TMCC3Q9ULS5 477 aa17.55■□□□□ 0.4
ATG3-208ENST00000495756 A0A087WUU8 490 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 A0A1B0GTH9 108 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 SH3PXD2BA1X283 911 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 GJE1A6NN92 205 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 E2F6O75461 281 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 TFPIP10646 304 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 DNAJA1P31689 397 aaKnown RBP17.54■□□□□ 0.4
ATG3-208ENST00000495756 CLK1P49759 484 aaKnown RBP17.54■□□□□ 0.4
ATG3-208ENST00000495756 UGT2B15P54855 530 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 CLDN20P56880 219 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 LSM11P83369 360 aaKnown RBP eCLIP17.54■□□□□ 0.4
ATG3-208ENST00000495756 CRYZQ08257 329 aaKnown RBP17.54■□□□□ 0.4
ATG3-208ENST00000495756 GK3PQ14409 553 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 BCL2A1Q16548 175 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 TMEM176BQ3YBM2 270 aaPredicted RBP17.54■□□□□ 0.4
ATG3-208ENST00000495756 TBPL2Q6SJ96 375 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 MBOAT2Q6ZWT7 520 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 GGNQ86UU5 652 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 GHDCQ8N2G8 530 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 PQLC1Q8N2U9 271 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 RELTQ969Z4 430 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 CENPNQ96H22 339 aaPredicted RBP17.54■□□□□ 0.4
ATG3-208ENST00000495756 BBC3Q96PG8 261 aaPredicted RBP17.54■□□□□ 0.4
ATG3-208ENST00000495756 TIMP4Q99727 224 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 SEMA6AQ9H2E6 1030 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 DCLRE1BQ9H816 532 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 TNFRSF10DQ9UBN6 386 aa17.54■□□□□ 0.4
ATG3-208ENST00000495756 COL6A6A6NMZ7 2263 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 KPNA4O00629 521 aaPredicted RBP17.53■□□□□ 0.4
ATG3-208ENST00000495756 BAG2O95816 211 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 ZNF708P17019 499 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 MLLT10P55197 1068 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 CLDN18P56856 261 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 C1orf140Q5VVS0 124 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 C1QL3Q5VWW1 255 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 C5orf46Q6UWT4 87 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 TMEM179BQ7Z7N9 219 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 RNF113BQ8IZP6 322 aaKnown RBP17.53■□□□□ 0.4
ATG3-208ENST00000495756 KTI12Q96EK9 354 aaPredicted RBP17.53■□□□□ 0.4
ATG3-208ENST00000495756 ARL5BQ96KC2 179 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 KLHL15Q96M94 604 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 POTEKPQ9BYX7 375 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 MEPEQ9NQ76 525 aaPredicted RBP17.53■□□□□ 0.4
ATG3-208ENST00000495756 MED31Q9Y3C7 131 aa17.53■□□□□ 0.4
ATG3-208ENST00000495756 TRAV36DV7A0A075B6V5 113 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 OR14I1A6ND48 311 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 SEC14L5O43304 696 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 MGRN1O60291 552 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 ANPEPP15144 967 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 SUCLG1P53597 346 aaKnown RBP17.52■□□□□ 0.4
ATG3-208ENST00000495756 CLDN15P56746 228 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 LAPTM4AQ15012 233 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 RRM2BQ7LG56 351 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 CHERPQ8IWX8 916 aaKnown RBP17.52■□□□□ 0.4
ATG3-208ENST00000495756 NRMQ8IXM6 262 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 UBQLNLQ8IYU4 475 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 OR4K5Q8NGD3 323 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 PFN4Q8NHR9 129 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 CPT1CQ8TCG5 803 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 SARAFQ96BY9 339 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 OR5B2Q96R09 309 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 KLHL4Q9C0H6 718 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 HDGFL3Q9Y3E1 203 aa17.52■□□□□ 0.4
ATG3-208ENST00000495756 A0A0J9YW62 118 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 H0YC42 278 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 PIP5K1CO60331 668 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 AHSA1O95433 338 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 CPN1P15169 458 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 FPR1P21462 350 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 TPD52P55327 224 aaPredicted RBP17.51■□□□□ 0.39
ATG3-208ENST00000495756 C19orf57Q0VDD7 668 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 MYBPHQ13203 477 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 MICAQ29983 383 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 CTU2Q2VPK5 515 aaKnown RBP17.51■□□□□ 0.39
ATG3-208ENST00000495756 SHQ1Q6PI26 577 aaKnown RBP17.51■□□□□ 0.39
ATG3-208ENST00000495756 ESPNLQ6ZVH7 1005 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 FGD2Q7Z6J4 655 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 TAAR8Q969N4 342 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 DNAJA3Q96EY1 480 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 PTDSS2Q9BVG9 487 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 C20orf141Q9NUB4 165 aa17.51■□□□□ 0.39
ATG3-208ENST00000495756 C6orf203Q9P0P8 240 aaPredicted RBP17.51■□□□□ 0.39
ATG3-208ENST00000495756 STX18Q9P2W9 335 aaKnown RBP17.51■□□□□ 0.39
ATG3-208ENST00000495756 RP1L1Q8IWN7 2480 aaPredicted RBP17.5■□□□□ 0.39
ATG3-208ENST00000495756 A0A1W2PNR3 127 aa17.5■□□□□ 0.39
ATG3-208ENST00000495756 NPIPA2E9PIF3 369 aa17.5■□□□□ 0.39
ATG3-208ENST00000495756 NPIPA3F8WFD2 350 aa17.5■□□□□ 0.39
ATG3-208ENST00000495756 EIF1AYO14602 144 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms