RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CMC2Q9NRP2 79 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 MALT1Q9UDY8 824 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 TEX51A0A1B0GUA7 166 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 A0A1W2PQL4 384 aaPredicted RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 DCTN6O00399 190 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 AK1P00568 194 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 FBLP22087 321 aaKnown RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 SLC2A5P22732 501 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 TCEA1P23193 301 aaKnown RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 AQP2P41181 271 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 PPP5CP53041 499 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 CTBP2P56545 445 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF85Q03923 595 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF117Q03924 483 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 SKP2Q13309 424 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 C1DQ13901 141 aaKnown RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 EBPQ15125 230 aaKnown RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 FAM199XQ6PEV8 388 aaPredicted RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF322Q6U7Q0 402 aaPredicted RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 PLXDC1Q8IUK5 500 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 GRAMD2AQ8IUY3 354 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 OR5J2Q8NH18 312 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 ARPC5LQ9BPX5 153 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 NDC1Q9BTX1 674 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 WDR12Q9GZL7 423 aaKnown RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 ADGRL4Q9HBW9 690 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 ABCB9Q9NP78 766 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 SACM1LQ9NTJ5 587 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 ASB6Q9NWX5 421 aa9.5□□□□□ -0.89
SAMM50-206ENST00000494795 H2AFY2Q9P0M6 372 aaPredicted RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 EXOGQ9Y2C4 368 aaKnown RBP9.5□□□□□ -0.89
SAMM50-206ENST00000494795 TMEM265A0A087WTH1 108 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 A0A087WUJ7 227 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 TMEM129A0AVI4 362 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 OR6C68A6NDL8 312 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 H3BSH0 61 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 SCO2O43819 266 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 FMO6PO60774 539 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 SNX4O95219 450 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 IGHA1P01876 353 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 ACVR1BP36896 505 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF79Q15937 498 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 BAK1Q16611 211 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 TRIM16LQ309B1 348 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 ULK3Q6PHR2 472 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 GPR135Q8IZ08 494 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 MAML2Q8IZL2 1156 aaPredicted RBP9.49□□□□□ -0.89
SAMM50-206ENST00000494795 RNF113BQ8IZP6 322 aaKnown RBP9.49□□□□□ -0.89
SAMM50-206ENST00000494795 UBE2J2Q8N2K1 259 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 EID2Q8N6I1 236 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 ALG8Q9BVK2 526 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 TCRBV16S1A1N1A0A5B0 115 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 PRR23D1E9PI22 279 aaPredicted RBP9.49□□□□□ -0.89
SAMM50-206ENST00000494795 SELENOFO60613 162 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 CFIP05156 583 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 PRR23D2P0DMB1 279 aaPredicted RBP9.49□□□□□ -0.89
SAMM50-206ENST00000494795 CLDN6P56747 220 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 LYSMD4Q5XG99 296 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 IL20RBQ6UXL0 311 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 KANSL1Q7Z3B3 1105 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 ARIH2OSQ8N7S6 290 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 Q96M85 177 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 MROQ9BYG7 248 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 RAB33BQ9H082 229 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 SMURF1Q9HCE7 757 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 TIGARQ9NQ88 270 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 OCIAD1Q9NX40 245 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 CCDC59Q9P031 241 aaKnown RBP9.49□□□□□ -0.89
SAMM50-206ENST00000494795 RPS6KB2Q9UBS0 482 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 CHRNA9Q9UGM1 479 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 SSR3Q9UNL2 185 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 COPS3Q9UNS2 423 aa9.49□□□□□ -0.89
SAMM50-206ENST00000494795 TTC28Q96AY4 2481 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 SHISA8B8ZZ34 492 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 UPK1BO75841 260 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 RPS5P46782 204 aaKnown RBP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 EPHA4P54764 986 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 TPBGQ13641 420 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 INPP5JQ15735 1006 aaPredicted RBP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 PLK5Q496M5 336 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 TP53I3Q53FA7 332 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 CCDC190Q86UF4 302 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 CADM3Q8N126 398 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF454Q8N9F8 522 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 FAM98AQ8NCA5 519 aaKnown RBP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 STT3BQ8TCJ2 826 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 NR4A3Q92570 626 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 C4orf36Q96KX1 117 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 G6PC3Q9BUM1 346 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 V9GYH0 126 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 J3QLW9 94 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 GABRPO00591 440 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 HCRTR2O43614 444 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 CDC40O60508 579 aaKnown RBP eCLIP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 HPGDP15428 266 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF19P17023 458 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 SDHBP21912 280 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 EPHA8P29322 1005 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms