RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CALHM2Q9HA72 323 aa9.96□□□□□ -0.81
APTX-230ENST00000494649 TMEM27Q9HBJ8 222 aa9.96□□□□□ -0.81
APTX-230ENST00000494649 NDE1Q9NXR1 346 aa9.96□□□□□ -0.81
APTX-230ENST00000494649 KLHL13Q9P2N7 655 aa9.96□□□□□ -0.81
APTX-230ENST00000494649 TESQ9UGI8 421 aaKnown RBP9.96□□□□□ -0.81
APTX-230ENST00000494649 CD300AQ9UGN4 299 aa9.96□□□□□ -0.81
APTX-230ENST00000494649 BAG5Q9UL15 447 aa9.96□□□□□ -0.81
APTX-230ENST00000494649 AP3M1Q9Y2T2 418 aa9.96□□□□□ -0.81
APTX-230ENST00000494649 DOPEY1Q5JWR5 2465 aa9.96□□□□□ -0.82
APTX-230ENST00000494649 MBD3L4A6NDZ8 208 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 MBD3L3A6NE82 208 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 WIPF3A6NGB9 483 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 MBD3L5A6NJ08 208 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 ZNF814B7Z6K7 855 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 EEF1E1-BLOC1S5C9J1V9 151 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SYT5O00445 386 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 FAAHO00519 579 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 ARPC2O15144 300 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 EEF1E1O43324 174 aaKnown RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 RAMP1O60894 148 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SYNGR4O95473 234 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 PLGP00747 810 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 IFNA14P01570 189 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 THY1P04216 161 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 IMPDH2P12268 514 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 HTR1EP28566 365 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 HTR3AP46098 478 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 OR2B6P58173 313 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 OR7A5Q15622 319 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 ZNF239Q16600 458 aaKnown RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 MTFR2Q6P444 385 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 VWA1Q6PCB0 445 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 LUZP2Q86TE4 346 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 MED12LQ86YW9 2145 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 CCDC103Q8IW40 242 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 MBD3L2Q8NHZ7 208 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 PHF10Q8WUB8 498 aaKnown RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 RASSF5Q8WWW0 418 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SLC25A36Q96CQ1 311 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 DDIT4LQ96D03 193 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 KTI12Q96EK9 354 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 DOCK7Q96N67 2140 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 ZNF559Q9BR84 538 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SEC14L4Q9UDX3 406 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 MCTS1Q9ULC4 181 aaKnown RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 SLC7A7Q9UM01 511 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SLC9A8Q9Y2E8 581 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 NBPF19A0A087WUL8 3843 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 NCOA6Q14686 2063 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 A0A0B4J2E0 115 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 A0A1B0GX12 115 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 LRRN3E7EW58 273 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 GYG2O15488 501 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 GMNNO75496 209 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SMNDC1O75940 238 aaKnown RBP eCLIP9.95□□□□□ -0.82
APTX-230ENST00000494649 C8BP07358 591 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 FPR1P21462 350 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 TIMP3P35625 211 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 EGR4Q05215 589 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SF3B4Q15427 424 aaKnown RBP eCLIP9.95□□□□□ -0.82
APTX-230ENST00000494649 ZSWIM7Q19AV6 140 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 PDSS1Q5T2R2 415 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 WDR88Q6ZMY6 472 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 TMPPEQ6ZT21 453 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 LSMEM1Q8N8F7 131 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 RELL2Q8NC24 303 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 WNT2BQ93097 391 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SLC7A6OSQ96CW6 309 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 TRIM2Q9C040 744 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 C12orf49Q9H741 205 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SELENONQ9NZV5 590 aa9.95□□□□□ -0.82
APTX-230ENST00000494649 SPIN1Q9Y657 262 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 USP9YO00507 2555 aaPredicted RBP9.95□□□□□ -0.82
APTX-230ENST00000494649 MPDZO75970 2070 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 HECTD1Q9ULT8 2610 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 PRSS44E7EML9 344 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 C19orf84I3L1E1 186 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 hCG_2039718K7EN88 272 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 SMAD9O15198 467 aaKnown RBP9.94□□□□□ -0.82
APTX-230ENST00000494649 PRKD3O94806 890 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 DIRAS1O95057 198 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 AKR7A3O95154 331 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 HOXD4P09016 255 aaPredicted RBP9.94□□□□□ -0.82
APTX-230ENST00000494649 HSD17B1P14061 328 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 CHRNB4P30926 498 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 CEACAM8P31997 349 aaPredicted RBP9.94□□□□□ -0.82
APTX-230ENST00000494649 TAS2R41P59536 307 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 MS4A2Q01362 244 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 RIPPLY2Q5TAB7 128 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 ULK3Q6PHR2 472 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 CBLL1Q75N03 491 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 FCRLAQ7L513 359 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 ZNF808Q8N4W9 903 aaPredicted RBP9.94□□□□□ -0.82
APTX-230ENST00000494649 SLC25A43Q8WUT9 341 aaPredicted RBP9.94□□□□□ -0.82
APTX-230ENST00000494649 LZICQ8WZA0 190 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 CPNE4Q96A23 557 aaPredicted RBP9.94□□□□□ -0.82
APTX-230ENST00000494649 TM9SF2Q99805 663 aa9.94□□□□□ -0.82
APTX-230ENST00000494649 AMBRA1Q9C0C7 1298 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms