RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ATXN8OSP0DMR3 200 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 CD8BP10966 210 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 BCKDHBP21953 392 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 MYL9P24844 172 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 ATP6V1E1P36543 226 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 NUBP1P53384 320 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 Q3ZCU0 254 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 OR52L1Q8NGH7 329 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 C16orf52Q8NHV5 167 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 UFD1Q92890 307 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 TBX5Q99593 518 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 Q9N2J8 555 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 SDHAF3Q9NRP4 125 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 DNAJB12Q9NXW2 375 aaKnown RBP12.68□□□□□ -0.38
VCP-207ENST00000493886 FLRT3Q9NZU0 649 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 GRIP1Q9Y3R0 1128 aa12.68□□□□□ -0.38
VCP-207ENST00000493886 A0A0B4J2E0 115 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 A0A1B0GX12 115 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 SHISA3A0PJX4 238 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 H0YIG0 161 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 ADAM11O75078 769 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 IL1AP01583 271 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 IFNA16P05015 189 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 PSKH1P11801 424 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 CD1CP29017 333 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 EPHA4P54764 986 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 FUT7Q11130 342 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 KCNAB1Q14722 419 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 GRM7Q14831 915 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 NNATQ16517 81 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 CNIH2Q6PI25 160 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 CDK20Q8IZL9 346 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 CADM2Q8N3J6 435 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 ASCC1Q8N9N2 400 aaKnown RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 ST8SIA2Q92186 375 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 BPIFA2Q96DR5 249 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 PTCHD1Q96NR3 888 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 WDFY2Q96P53 400 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 OR10A5Q9H207 317 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 HINT3Q9NQE9 182 aaKnown RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 CACNA1IQ9P0X4 2223 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 LRIT1Q9P2V4 623 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 MAU2Q9Y6X3 613 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 A0A1B0GWA3 101 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 ZC3H12DA2A288 527 aaKnown RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 PLA2G10O15496 165 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 CHP2O43745 196 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 CT45A8P0DMV1 189 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 CT45A9P0DMV2 189 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 BMP7P18075 431 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 ACAA2P42765 397 aaKnown RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 IL18Q14116 193 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 ZNF141Q15928 474 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 CT45A2Q5DJT8 189 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 TMPRSS11FQ6ZWK6 438 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 OR5H6Q8NGV6 325 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 AHCYL2Q96HN2 611 aaKnown RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 ZNF578Q96N58 590 aaPredicted RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 GFM1Q96RP9 751 aaKnown RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 ENKD1Q9H0I2 346 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 MEPEQ9NQ76 525 aaPredicted RBP12.67□□□□□ -0.38
VCP-207ENST00000493886 CBLCQ9ULV8 474 aa12.67□□□□□ -0.38
VCP-207ENST00000493886 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.66□□□□□ -0.38
VCP-207ENST00000493886 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 A6NIN4 97 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 ERVH48-1M5A8F1 160 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 ST8SIA5O15466 376 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 TBXA2RP21731 343 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 HTR1FP30939 366 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 OR1D5P58170 312 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 PLK5Q496M5 336 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 BTN2A1Q7KYR7 527 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 MARCH9Q86YJ5 346 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 CPOQ8IVL8 374 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 OR8K3Q8NH51 312 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 SLC7A6Q92536 515 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 G6PC3Q9BUM1 346 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 KCNN2Q9H2S1 579 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 H2AFY2Q9P0M6 372 aaPredicted RBP12.66□□□□□ -0.38
VCP-207ENST00000493886 TNRC18O15417 2968 aaPredicted RBP12.66□□□□□ -0.38
VCP-207ENST00000493886 NPIPB9F8W1W9 429 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 BHLHE40O14503 412 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 RCBTB2O95199 551 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 SAGP10523 405 aaPredicted RBP12.66□□□□□ -0.38
VCP-207ENST00000493886 CTBP2P56545 445 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 SERTAD2Q14140 314 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.386e-7■■■■□ 26.5
VCP-207ENST00000493886 XKRXQ6PP77 449 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 CXXC5Q7LFL8 322 aaKnown RBP12.66□□□□□ -0.38
VCP-207ENST00000493886 BMP8AQ7Z5Y6 402 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 Q8N402 240 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 OR13C2Q8NGS9 318 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 TRIM2Q9C040 744 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 B3GAT2Q9NPZ5 323 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 SF3B6Q9Y3B4 125 aaKnown RBP12.66□□□□□ -0.38
VCP-207ENST00000493886 OR10H1Q9Y4A9 318 aa12.66□□□□□ -0.38
VCP-207ENST00000493886 TRAV20A0A0B4J274 112 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 STK25O00506 426 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms