RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 MAP3K3Q99759 626 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 CHRDQ9H2X0 955 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 C12orf10Q9HB07 376 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 NRIP3Q9NQ35 241 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ENAMQ9NRM1 1142 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 POU2F3Q9UKI9 436 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 MOKQ9UQ07 419 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ERVK-19Q9WJR5 959 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 IER3IP1Q9Y5U9 82 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 A0A1B0GTQ1 180 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ELOA3DA6NLF2 546 aaPredicted RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF879B4DU55 563 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 TMEM150CB9EJG8 249 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SCDO00767 359 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 TFECO14948 347 aaPredicted RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 LRRTM2O43300 516 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 HCRTR1O43613 425 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SLC43A1O75387 559 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 MRPL3P09001 348 aaKnown RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 CHRNB1P11230 501 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SRFP11831 508 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 RAB3BP20337 219 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 PTNP21246 168 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 RORAP35398 523 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 KIR2DL3P43628 341 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SLC6A8P48029 635 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 PGDP52209 483 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 MAZP56270 477 aaKnown RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SIRPAP78324 504 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 CSTF1Q05048 431 aaKnown RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SLC3A1Q07837 685 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 FHL1Q13642 323 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ELOA3BQ3SY89 546 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 TBRG1Q3YBR2 411 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 CDONQ4KMG0 1287 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ZC3H14Q6PJT7 736 aaKnown RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 B3GLCTQ6Y288 498 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 OVCH1Q7RTY7 1134 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 C17orf82Q86X59 251 aaPredicted RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 FAM71CQ8NEG0 241 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 CADM4Q8NFZ8 388 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ELOA3Q8NG57 546 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 OR4N2Q8NGD1 307 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SLC7A6Q92536 515 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 GHSRQ92847 366 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 CREB3L1Q96BA8 519 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SMIM19Q96E16 107 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 GDF15Q99988 308 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ORAI3Q9BRQ5 295 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 TRAF4Q9BUZ4 470 aaPredicted RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 MRI1Q9BV20 369 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SOHLH2Q9NX45 425 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ZMIZ1Q9ULJ6 1067 aa8.86□□□□□ -0.99
NPHP3-209ENST00000493732 SIRT4Q9Y6E7 314 aaPredicted RBP8.86□□□□□ -0.99
NPHP3-209ENST00000493732 ARPC4-TTLL3A0A0A6YYG9 625 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 SHISA3A0PJX4 238 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 ZC3H12DA2A288 527 aaKnown RBP8.85□□□□□ -0.99
NPHP3-209ENST00000493732 SMIM30A4D0T7 59 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 NOTOA8MTQ0 251 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 METTL12A8MUP2 240 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 PDCD5O14737 125 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 NCR1O76036 304 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 IL33O95760 270 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 YES1P07947 543 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 NGFRP08138 427 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 TACSTD2P09758 323 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 IL9P15248 144 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 HIST1H1CP16403 213 aaKnown RBP8.85□□□□□ -0.99
NPHP3-209ENST00000493732 ELK1P19419 428 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 S100A1P23297 94 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 SHC1P29353 583 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 GABRA4P48169 554 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 PPM1FP49593 454 aaPredicted RBP8.85□□□□□ -0.99
NPHP3-209ENST00000493732 OR12D2P58182 307 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 HNRNPKP61978 463 aaKnown RBP eCLIP8.85□□□□□ -0.99
NPHP3-209ENST00000493732 BTG1P62324 171 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 RPS4XP62701 263 aaKnown RBP8.85□□□□□ -0.99
NPHP3-209ENST00000493732 RACK1P63244 317 aaKnown RBP8.85□□□□□ -0.99
NPHP3-209ENST00000493732 MRPS15P82914 257 aaKnown RBP8.85□□□□□ -0.99
NPHP3-209ENST00000493732 CDK5R1Q15078 307 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 EMC4Q5J8M3 183 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF57Q68EA5 555 aaPredicted RBP8.85□□□□□ -0.99
NPHP3-209ENST00000493732 SLC6A19Q695T7 634 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 SFTPA2Q8IWL1 248 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 SLC35F2Q8IXU6 374 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 CYB561A3Q8NBI2 242 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 OR4K13Q8NH42 304 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 LMX1AQ8TE12 382 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 THAP4Q8WY91 577 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 RFT1Q96AA3 541 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 C3orf49Q96BT1 292 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 ST6GAL2Q96JF0 529 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 PGLYRP3Q96LB9 341 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 MNTQ99583 582 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 MARVELD1Q9BSK0 173 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 RBCK1Q9BYM8 510 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 HDHD2Q9H0R4 259 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 MMP28Q9H239 520 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 ZCCHC4Q9H5U6 513 aa8.85□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF576Q9H609 170 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms