RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 SULT2B1O00204 365 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 KLF4O43474 513 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 ATP8B1O43520 1251 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 FZD7O75084 574 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 MFN2O95140 757 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 PLGP00747 810 aaPredicted RBP12.11□□□□□ -0.47
PDCD11-206ENST00000493610 YES1P07947 543 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 VIMP08670 466 aaKnown RBP12.11□□□□□ -0.47
PDCD11-206ENST00000493610 CRYGSP22914 178 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 PRKAR1BP31321 381 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 HTR3AP46098 478 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
PDCD11-206ENST00000493610 ARFIP2P53365 341 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 CTBP2P56545 445 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 EGR4Q05215 589 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 SCARB2Q14108 478 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 LARS2Q15031 903 aaKnown RBP12.11□□□□□ -0.47
PDCD11-206ENST00000493610 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 EXOC3L2Q2M3D2 409 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 REEP3Q6NUK4 255 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.11□□□□□ -0.47
PDCD11-206ENST00000493610 CALHM3Q86XJ0 350 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 GPR32P1Q8NGA4 272 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 SLC35B4Q969S0 331 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 C6orf203Q9P0P8 240 aaPredicted RBP12.11□□□□□ -0.47
PDCD11-206ENST00000493610 USP22Q9UPT9 525 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 TRAPPC4Q9Y296 219 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 IFT52Q9Y366 437 aa12.11□□□□□ -0.47
PDCD11-206ENST00000493610 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 TROVE2P10155 538 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDCD11-206ENST00000493610 TFPIP10646 304 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 PSMB1P20618 241 aaKnown RBP12.1□□□□□ -0.47
PDCD11-206ENST00000493610 OR3A2P47893 321 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 SLC16A1P53985 500 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 NFYCQ13952 458 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 GNA13Q14344 377 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 PDK3Q15120 406 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 POU4F3Q15319 338 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 RABL3Q5HYI8 236 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 GTF2IRD2BQ6EKJ0 949 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 WBP2NLQ6ICG8 309 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 NANOGP8Q6NSW7 305 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 C6orf89Q6UWU4 347 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 GTF2IRD2Q86UP8 949 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 TSPYL5Q86VY4 417 aaPredicted RBP12.1□□□□□ -0.47
PDCD11-206ENST00000493610 ZIC4Q8N9L1 334 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 OR4D11Q8NGI4 311 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 PTDSS2Q9BVG9 487 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 POTEKPQ9BYX7 375 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 KLHL4Q9C0H6 718 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 NANOGQ9H9S0 305 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 TMEM181Q9P2C4 612 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 KLHL14Q9P2G3 628 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 PRDM4Q9UKN5 801 aa12.1□□□□□ -0.47
PDCD11-206ENST00000493610 CELSR1Q9NYQ6 3014 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 IGKV1D-42A0A075B6H8 117 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 LIPT2A6NK58 231 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 FTCDNL1E5RQL4 147 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 ANGPT2O15123 496 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 DNPH1O43598 174 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 LYPD3O95274 346 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 CD247P20963 164 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 FPR1P21462 350 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 AQP1P29972 269 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 IST1P53990 364 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 FOXG1P55316 489 aaPredicted RBP12.09□□□□□ -0.47
PDCD11-206ENST00000493610 CSNK2A1P68400 391 aaPredicted RBP12.09□□□□□ -0.47
PDCD11-206ENST00000493610 NPTX1Q15818 432 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 DUSP7Q16829 419 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 ZSWIM7Q19AV6 140 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
PDCD11-206ENST00000493610 TMEM201Q5SNT2 666 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 REP15Q6BDI9 236 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 BEND4Q6ZU67 534 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 CXorf67Q86X51 503 aaPredicted RBP12.09□□□□□ -0.47
PDCD11-206ENST00000493610 CADM2Q8N3J6 435 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 LSMEM1Q8N8F7 131 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 HIPK4Q8NE63 616 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 ARMCX1Q9P291 453 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 KLHL9Q9P2J3 617 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 GMPR2Q9P2T1 348 aaKnown RBP12.09□□□□□ -0.47
PDCD11-206ENST00000493610 ST6GALNAC2Q9UJ37 374 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 ZNF232Q9UNY5 417 aa12.09□□□□□ -0.47
PDCD11-206ENST00000493610 SPIN1Q9Y657 262 aaPredicted RBP12.09□□□□□ -0.47
PDCD11-206ENST00000493610 PRRC2AP48634 2157 aaKnown RBP12.08□□□□□ -0.48
PDCD11-206ENST00000493610 A0A1B0GWA3 101 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 EVPLLA8MZ36 301 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 C5orf58C9J3I9 102 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 GOSR1O95249 250 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 THY1P04216 161 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 FKBP2P26885 142 aaKnown RBP12.08□□□□□ -0.48
PDCD11-206ENST00000493610 MAP2K6P52564 334 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 SEC24CP53992 1094 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 OR2B6P58173 313 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 CEACAM7Q14002 265 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 SLC17A1Q14916 467 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 COQ5Q5HYK3 327 aa12.08□□□□□ -0.48
PDCD11-206ENST00000493610 SNX32Q86XE0 403 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms