RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 FAM46AQ96IP4 442 aaKnown RBP12.81□□□□□ -0.36
PDZRN3-210ENST00000492909 ADAM19Q9H013 955 aa12.81□□□□□ -0.36
PDZRN3-210ENST00000492909 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
PDZRN3-210ENST00000492909 TBCCD1Q9NVR7 557 aa12.81□□□□□ -0.36
PDZRN3-210ENST00000492909 PAK1IP1Q9NWT1 392 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-210ENST00000492909 TAS2R10Q9NYW0 307 aa12.81□□□□□ -0.36
PDZRN3-210ENST00000492909 PCDHGB1Q9Y5G3 927 aa12.81□□□□□ -0.36
PDZRN3-210ENST00000492909 CNTRLQ7Z7A1 2325 aa12.81□□□□□ -0.36
PDZRN3-210ENST00000492909 LAMA5O15230 3695 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 CFAP47Q6ZTR5 3102 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 KPNA4O00629 521 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 GNB5O14775 395 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 P04436 131 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 TACR3P29371 465 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 GSSP48637 474 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 IL5RAQ01344 420 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 PRKCDQ05655 676 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 PIGFQ07326 219 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 TSPAN31Q12999 210 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 RAPSNQ13702 412 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 AGAP7PQ5VUJ5 663 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 MDGA2Q7Z553 956 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 CDK20Q8IZL9 346 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 PSD4Q8NDX1 1056 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 PFN4Q8NHR9 129 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 AGAP4Q96P64 663 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 UTP23Q9BRU9 249 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 FUNDC2Q9BWH2 189 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 DPH1Q9BZG8 443 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 SACM1LQ9NTJ5 587 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 LRFN1Q9P244 771 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 REV1Q9UBZ9 1251 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 ENPP5Q9UJA9 477 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 TMEM5Q9Y2B1 443 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 ACACAQ13085 2346 aa12.8□□□□□ -0.36
PDZRN3-210ENST00000492909 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 ZNF99A8MXY4 864 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 B4DXG7 233 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 CDK2AP1O14519 115 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 SNX4O95219 450 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 IFI30P13284 250 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 OSMP13725 252 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 FPR3P25089 353 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 EPHA2P29317 976 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 CD96P40200 585 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 ZNF41P51814 821 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 GP2P55259 537 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 CXCR4P61073 352 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 ALDH6A1Q02252 535 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 GRINAQ7Z429 371 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 MEX3DQ86XN8 651 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 ANKRD13BQ86YJ7 626 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 WDSUB1Q8N9V3 476 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 KDF1Q8NAX2 398 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 CNIH3Q8TBE1 160 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 ST8SIA1Q92185 356 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 BPIFA2Q96DR5 249 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 GPA33Q99795 319 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 BCL7BQ9BQE9 202 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 SLC19A3Q9BZV2 496 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 DSN1Q9H410 356 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 PTGES2Q9H7Z7 377 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 PROK2Q9HC23 129 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 PALMDQ9NP74 551 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 MEPEQ9NQ76 525 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 C20orf141Q9NUB4 165 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 FAIMQ9NVQ4 179 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 GPR83Q9NYM4 423 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 ZMIZ1Q9ULJ6 1067 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 A6NL46 340 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 KLF4O43474 513 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 CXCR1P25024 350 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 GPR4P46093 362 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 HTR3AP46098 478 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 MASP1P48740 699 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 POLR2HP52434 150 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 CRISP1P54107 249 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 CTBP2P56545 445 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 INPP5JQ15735 1006 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 ANKDD1AQ495B1 522 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 TUBA3EQ6PEY2 450 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 LINC00696Q6ZRV3 163 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 SLC16A12Q6ZSM3 486 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 ZNF227Q86WZ6 799 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 PLCZ1Q86YW0 608 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 SPACA3Q8IXA5 215 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 FADS6Q8N9I5 356 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 OR2M3Q8NG83 312 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 OR4K17Q8NGC6 315 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 NTNG2Q96CW9 530 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 PLEKHA8Q96JA3 519 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 HRASLS5Q96KN8 279 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 TMEM43Q9BTV4 400 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 WARS2Q9UGM6 360 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 OSGIN1Q9UJX0 560 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 TPRKBQ9Y3C4 175 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 PCDHGB6Q9Y5F9 930 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 HRH3Q9Y5N1 445 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 GMPPBQ9Y5P6 360 aa12.79□□□□□ -0.36
PDZRN3-210ENST00000492909 TPRP12270 2363 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms