RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 GCDHQ92947 438 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-220ENST00000492280 ST6GAL2Q96JF0 529 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 FOXN4Q96NZ1 517 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 NDC1Q9BTX1 674 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 MED18Q9BUE0 208 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 RTN4RQ9BZR6 473 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 SLC22A4Q9H015 551 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 C8orf33Q9H7E9 229 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-220ENST00000492280 PPP1R3EQ9H7J1 279 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 ACOXLQ9NUZ1 547 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 COQ9O75208 318 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 MYL9P24844 172 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 CAPZBP47756 277 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 SRP9P49458 86 aaKnown RBP11.42□□□□□ -0.58
HMGN1-220ENST00000492280 EFNA3P52797 238 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 PPP3R1P63098 170 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 GALEQ14376 348 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF613Q6PF04 617 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 SHISA6Q6ZSJ9 500 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 IZUMO1Q8IYV9 350 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 OR4M1Q8NGD0 313 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 OR5H6Q8NGV6 325 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 OR51Q1Q8NH59 317 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 UPRTQ96BW1 309 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF486Q96H40 463 aaPredicted RBP11.42□□□□□ -0.58
HMGN1-220ENST00000492280 ELF4Q99607 663 aaPredicted RBP11.42□□□□□ -0.58
HMGN1-220ENST00000492280 FOXQ1Q9C009 403 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 ERVMER34-1Q9H9K5 563 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 MTCH2Q9Y6C9 303 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 ANKRD61A6NGH8 418 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 SLC22A31A6NKX4 558 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 PRR32B1ATL7 298 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 GPANK1O95872 356 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 F13BP05160 661 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 PEPDP12955 493 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 GPR3P46089 330 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 ASAH1Q13510 395 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 VASH1Q7L8A9 365 aaPredicted RBP11.42□□□□□ -0.58
HMGN1-220ENST00000492280 RNF113BQ8IZP6 322 aaKnown RBP11.42□□□□□ -0.58
HMGN1-220ENST00000492280 C19orf18Q8NEA5 215 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 GHSRQ92847 366 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 PGLYRP3Q96LB9 341 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 SLC25A18Q9H1K4 315 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 Q9N2J8 555 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 ISYNA1Q9NPH2 558 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 GNG8Q9UK08 70 aa11.42□□□□□ -0.58
HMGN1-220ENST00000492280 MRPS7Q9Y2R9 242 aaKnown RBP11.42□□□□□ -0.58
HMGN1-220ENST00000492280 PI4KAP42356 2102 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 OR6C68A6NDL8 312 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 C17orf105B2RV13 164 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 CHURC1-FNTBB4DL54 471 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 MT-ND5P03915 603 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 HK1P19367 917 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 FNTBP49356 437 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 EVX1P49640 407 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 KRR1Q13601 381 aaKnown RBP11.41□□□□□ -0.58
HMGN1-220ENST00000492280 LCN1P1Q5VSP4 162 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF544Q6NX49 715 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 MED25Q71SY5 747 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 PHOSPHO1Q8TCT1 267 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 HSD17B8Q92506 261 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 MOGAT1Q96PD6 335 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 OR14A2Q96R54 314 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 LMF2Q9BU23 707 aaKnown RBP11.41□□□□□ -0.58
HMGN1-220ENST00000492280 HDHD2Q9H0R4 259 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 ENAMQ9NRM1 1142 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 RTTNQ86VV8 2226 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 IGHV1OR15-9A0A0B4J2B8 117 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 CCDC85CA6NKD9 419 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 SNRPBP14678 240 aaKnown RBP11.41□□□□□ -0.58
HMGN1-220ENST00000492280 HOXD12P35452 270 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 AQP2P41181 271 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 MAP2K3P46734 347 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 FGFBP1Q14512 234 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 UBXN2BQ14CS0 331 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 ODF4Q2M2E3 257 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 SFXN4Q6P4A7 337 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.41□□□□□ -0.58
HMGN1-220ENST00000492280 GDPD1Q8N9F7 314 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF511Q8NB15 262 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 TOR1AIP2Q8NFQ8 470 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 ABHD4Q8TB40 342 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 SETD6Q8TBK2 473 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 C3orf49Q96BT1 292 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 Q96M85 177 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF426Q9BUY5 554 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 NXF5Q9H1B4 397 aaKnown RBP11.41□□□□□ -0.58
HMGN1-220ENST00000492280 FREM3P0C091 2139 aa11.41□□□□□ -0.58
HMGN1-220ENST00000492280 TEX13CA0A0J9YWL9 993 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 OR5K4A6NMS3 321 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 KHNYNO15037 678 aaKnown RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 IDH3BO43837 385 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 MST1P26927 711 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 SLC6A6P31641 620 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 AGFG1P52594 562 aaKnown RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 MRPS15P82914 257 aaKnown RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 TATDN3Q17R31 274 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 TMEM44Q2T9K0 475 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 C1orf189Q5VU69 101 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms