RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 PELI1Q96FA3 418 aa2.67□□□□□ -1.98
VTA1-204ENST00000491881 TGM7Q96PF1 710 aa2.67□□□□□ -1.98
VTA1-204ENST00000491881 NIPSNAP3BQ9BS92 247 aa2.67□□□□□ -1.98
VTA1-204ENST00000491881 PLGRKTQ9HBL7 147 aa2.67□□□□□ -1.98
VTA1-204ENST00000491881 POPDC2Q9HBU9 364 aa2.67□□□□□ -1.98
VTA1-204ENST00000491881 WDR62O43379 1518 aa2.67□□□□□ -1.98
VTA1-204ENST00000491881 TNS2Q63HR2 1409 aa2.67□□□□□ -1.98
VTA1-204ENST00000491881 PLEKHG1Q9ULL1 1385 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 METTL21EPA6NDL7 271 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 F5H6K3 240 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 ZNF780AO75290 641 aaPredicted RBP2.66□□□□□ -1.98
VTA1-204ENST00000491881 SCGNO76038 276 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 KLF8O95600 359 aaPredicted RBP2.66□□□□□ -1.98
VTA1-204ENST00000491881 HNF1AP20823 631 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 PTMSP20962 102 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 ATP6V1B2P21281 511 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 COX7A1P24310 79 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 MMP11P24347 488 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 GCAP28676 217 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 SHMT2P34897 504 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 PKNOX1P55347 436 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 SELENOTP62341 195 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 KLRC3Q07444 240 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 NSUN5P1Q3KNT7 163 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 C1orf146Q5VVC0 180 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 RNF165Q6ZSG1 346 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 CCDC65Q8IXS2 484 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 TMEM123Q8N131 208 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 FTMTQ8N4E7 242 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 CCDC71LQ8N9Z2 235 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 DCAF4L2Q8NA75 395 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 GMCL1P1Q8NEA9 526 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 UCN3Q969E3 161 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 SEC22AQ96IW7 307 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 TBX15Q96SF7 602 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 ZNF670Q9BS34 389 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 VCPKMTQ9H867 229 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 RAB18Q9NP72 206 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 UFSP2Q9NUQ7 469 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 AIG1Q9NVV5 245 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 PIPOXQ9P0Z9 390 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 ASF1AQ9Y294 204 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 V9GY05 133 aa2.66□□□□□ -1.98
VTA1-204ENST00000491881 KDRP35968 1356 aa2.65□□□□□ -1.98
VTA1-204ENST00000491881 IGHV3OR16-13A0A075B7E8 117 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 A0A0G2JRQ6 117 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 WI2-2373I1.2A0A1W2PRP0 233 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 USP27XA6NNY8 438 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 ARPC3O15145 178 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 RGS16O15492 202 aaPredicted RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 POLR2DO15514 142 aaKnown RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 ZNF861PO60384 105 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 PFKFB2O60825 505 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 P04436 131 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 CCDC130P13994 396 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 COX5AP20674 150 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 HTR1EP28566 365 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 CALCRP30988 508 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 RDXP35241 583 aaKnown RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 PRPHP41219 470 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 ZNF133P52736 654 aaPredicted RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 MAP2K1Q02750 393 aaPredicted RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 CKAP4Q07065 602 aaKnown RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 ZNF630Q2M218 657 aaPredicted RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 PAGE3Q5JUK9 113 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 LINC01555Q8NAE3 123 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 NEIL3Q8TAT5 605 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 FAM151AQ8WW52 585 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 CHCHD10Q8WYQ3 142 aaPredicted RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 EFHD2Q96C19 240 aaPredicted RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 CCNL2Q96S94 520 aaPredicted RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 HIST1H4GQ99525 98 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 SELENOIQ9C0D9 397 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 SLC25A22Q9H936 323 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 C6orf203Q9P0P8 240 aaPredicted RBP2.65□□□□□ -1.99
VTA1-204ENST00000491881 TRAF3IP3Q9Y228 551 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 SH3TC1Q8TE82 1336 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 PTPRMP28827 1452 aa2.65□□□□□ -1.99
VTA1-204ENST00000491881 PINLYPA6NC86 204 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 A8MUA0 341 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 IDSB3KWA1 339 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 PRRG1O14668 218 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 UGT1A9O60656 530 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 AP2A1O95782 977 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 LGI1O95970 557 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 HMGB2P26583 209 aaKnown RBP2.64□□□□□ -1.99
VTA1-204ENST00000491881 PRDX3P30048 256 aaKnown RBP2.64□□□□□ -1.99
VTA1-204ENST00000491881 RFC4P35249 363 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 RPL13AP40429 203 aaKnown RBP2.64□□□□□ -1.99
VTA1-204ENST00000491881 MAP3K8P41279 467 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 KLK7P49862 253 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 NUP107P57740 925 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 KLF17Q5JT82 389 aaPredicted RBP2.64□□□□□ -1.99
VTA1-204ENST00000491881 SAMD4BQ5PRF9 694 aaKnown RBP2.64□□□□□ -1.99
VTA1-204ENST00000491881 GALNT17Q6IS24 598 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 IL34Q6ZMJ4 242 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 ZNF571Q7Z3V5 609 aaPredicted RBP2.64□□□□□ -1.99
VTA1-204ENST00000491881 OR2L13Q8N349 312 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 C20orf203Q8NBC4 194 aa2.64□□□□□ -1.99
VTA1-204ENST00000491881 ZNF540Q8NDQ6 660 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms