RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SLC19A3Q9BZV2 496 aa19.65■□□□□ 0.74
VCPKMT-204ENST00000491402 C20orf141Q9NUB4 165 aa19.65■□□□□ 0.74
VCPKMT-204ENST00000491402 OR2M5A3KFT3 312 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 EFNA2O43921 213 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 ZNF24P17028 368 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 ELK4P28324 431 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 GCKP35557 465 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 B3GALT5-AS1P59052 145 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 PPP2R2BQ00005 443 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 WIPI1Q5MNZ9 446 aaPredicted RBP19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 ANKRD34AQ69YU3 496 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 C3orf33Q6P1S2 294 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 PGBD2Q6P3X8 592 aa19.64■□□□□ 0.73
VCPKMT-204ENST00000491402 ZNF407Q9C0G0 2248 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 MAP2K6P52564 334 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 SELENBP1Q13228 472 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 ZER1Q7Z7L7 766 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 ATG16L2Q8NAA4 619 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 LSM14AQ8ND56 463 aaKnown RBP19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 PIGXQ8TBF5 258 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 RBM4BQ9BQ04 359 aaKnown RBP19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 RBM4Q9BWF3 364 aaKnown RBP19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 OSBPL10Q9BXB5 764 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 ZDHHC11Q9H8X9 412 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 SMURF2Q9HAU4 748 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 SERINC1Q9NRX5 453 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 KIF17Q9P2E2 1029 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 DNAJC13O75165 2243 aa19.63■□□□□ 0.73
VCPKMT-204ENST00000491402 ZC3H12DA2A288 527 aaKnown RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 A8MVM7 634 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 GASTP01350 101 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 ALPLP05186 524 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 ZNF26P17031 533 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 CBLP22681 906 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 IFNGR2P38484 337 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 OMPP47874 163 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 CRYZQ08257 329 aaKnown RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 KLRB1Q12918 225 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 DAG1Q14118 895 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 PPP4R4Q6NUP7 873 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 RPUSD3Q6P087 351 aaKnown RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 C1orf94Q6P1W5 598 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 FAHD1Q6P587 224 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 PRICKLE2Q7Z3G6 844 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 MAGEE2Q8TD90 523 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 PNPLA2Q96AD5 504 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 TAAR6Q96RI8 345 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 KLHL4Q9C0H6 718 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 OR11A1Q9GZK7 315 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 TMEM185BQ9H7F4 350 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 KRCC1Q9NPI7 259 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 FAM208BQ5VWN6 2430 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 H3BML4 177 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 TFECO14948 347 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 ZNF208O43345 1280 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 NPIPB7O75200 414 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 PEPDP12955 493 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 IFI30P13284 250 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 ANXA8P13928 327 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 POU2F1P14859 743 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 DAPP51397 102 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 ALDH3A2P51648 485 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 PRKCDQ05655 676 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 NFATC3Q12968 1075 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 INAQ16352 499 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 MEX3DQ86XN8 651 aaKnown RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 ATP6V1C2Q8NEY4 427 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 BPIFA2Q96DR5 249 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 FAM46AQ96IP4 442 aaKnown RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 SFXN2Q96NB2 322 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 NIPSNAP1Q9BPW8 284 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 VCX3BQ9H321 246 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 ACKR4Q9NPB9 350 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 RALYQ9UKM9 306 aaKnown RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 MGAT4BQ9UQ53 548 aa19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 SPIN1Q9Y657 262 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-204ENST00000491402 SMG1Q96Q15 3661 aaKnown RBP19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 ENO4A6NNW6 628 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 ADAP00813 363 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 GFRA1P56159 465 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 CTBP2P56545 445 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 SLC10A1Q14973 349 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 SYT14P1Q58G82 188 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 KDM4DQ6B0I6 523 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 GALNT4Q8N4A0 578 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 STK35Q8TDR2 534 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 SLC25A43Q8WUT9 341 aaPredicted RBP19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 GTPBP3Q969Y2 492 aaKnown RBP19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 DDIT4LQ96D03 193 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 KTI12Q96EK9 354 aaPredicted RBP19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 C8orf4Q9NR00 106 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 USE1Q9NZ43 259 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 ZNF337Q9Y3M9 751 aa19.61■□□□□ 0.73
VCPKMT-204ENST00000491402 CFAP46Q8IYW2 2715 aa19.6■□□□□ 0.73
VCPKMT-204ENST00000491402 IGF2P01344 180 aa19.6■□□□□ 0.73
VCPKMT-204ENST00000491402 VHLP40337 213 aa19.6■□□□□ 0.73
VCPKMT-204ENST00000491402 GPR4P46093 362 aa19.6■□□□□ 0.73
VCPKMT-204ENST00000491402 C5orf46Q6UWT4 87 aa19.6■□□□□ 0.73
VCPKMT-204ENST00000491402 PACRGLQ8N7B6 248 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms