RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 LRRC28Q86X40 367 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 GALNT6Q8NCL4 622 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 LSM14AQ8ND56 463 aaKnown RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 MED18Q9BUE0 208 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 DHDHQ9UQ10 334 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PCDHGB2Q9Y5G2 931 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 SOCS6O14544 535 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 PITPNBP48739 271 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 TPBGQ13641 420 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM225Q6GV28 225 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 NIPAL3Q6P499 406 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 CNIH2Q6PI25 160 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 RCBTB1Q8NDN9 531 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 C16orf52Q8NHV5 167 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF417Q8TAU3 575 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 FCAMRQ8WWV6 532 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 UCN3Q969E3 161 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 SLC25A46Q96AG3 418 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 CREB3L1Q96BA8 519 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 METTL21EPA6NDL7 271 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 GJE1A6NN92 205 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 IL33O95760 270 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 YES1P07947 543 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 CD14P08571 375 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 H2BFMP0C1H6 154 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 NXPH1P58417 271 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 C17orf67Q0P5P2 114 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 MADCAM1Q13477 382 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 CRMP1Q14194 572 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 HBMQ6B0K9 141 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 UBE2J2Q8N2K1 259 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 GPER1Q99527 375 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 TEAD3Q99594 435 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 TTTY10Q9BZA0 68 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 AKIP1Q9NQ31 210 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 LHX9Q9NQ69 397 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 DHCR7Q9UBM7 475 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 REV1Q9UBZ9 1251 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 FFAR1O14842 300 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 PIAS2O75928 621 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 IGHV4-34P06331 123 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 MSX1P28360 303 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 GLO1Q04760 184 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 SF3A2Q15428 464 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 COL13A1Q5TAT6 717 aaPredicted RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 SLC16A12Q6ZSM3 486 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 TRMT10AQ8TBZ6 339 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 THAP3Q8WTV1 239 aaPredicted RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 ASB15Q8WXK1 588 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 NRTNQ99748 197 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 KATNB1Q9BVA0 655 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 TRBV11-1A0A0K0K1C0 115 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 A0A1B0GVI7 797 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 INMT-MINDY4F8WBC2 141 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 CTDSP2O14595 271 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 TSC22D2O75157 780 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 GPX5O75715 221 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 EML2O95834 649 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 DRD5P21918 477 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 RBMS1P29558 406 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 EEF1A1P68104 462 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 MRPS10P82664 201 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 QSOX2Q6ZRP7 698 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 PEG10Q86TG7 708 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 UEVLDQ8IX04 471 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 AGBL5Q8NDL9 886 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 ADAMTS14Q8WXS8 1223 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 NXPE2Q96DL1 559 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 ELF4Q99607 663 aaPredicted RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 GDF15Q99988 308 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 C7orf50Q9BRJ6 194 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 PRRG4Q9BZD6 226 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM138Q9NPI0 162 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 ATP13A2Q9NQ11 1180 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 HINT3Q9NQE9 182 aaKnown RBP6.77□□□□□ -1.33
NPHP3-208ENST00000490993 NTNG1Q9Y2I2 539 aa6.77□□□□□ -1.33
NPHP3-208ENST00000490993 A0A0B4J2E0 115 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 TEX13CA0A0J9YWL9 993 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 A0A1B0GX12 115 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 MEGF11A6BM72 1044 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 M0R082 166 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 GCM2O75603 506 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-208ENST00000490993 GLCEO94923 617 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 FUCA1P04066 466 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 JMJD7P0C870 316 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 IDUAP35475 653 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 SLC26A5P58743 744 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 GMFBP60983 142 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 SIRPAP78324 504 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 BTG2P78543 158 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 TLE3Q04726 772 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 UXS1Q8NBZ7 420 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 GRPEL2Q8TAA5 225 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 GPR148Q8TDV2 347 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 CCDC74AQ96AQ1 378 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 CPNE2Q96FN4 548 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-208ENST00000490993 FOXQ1Q9C009 403 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 EXO5Q9H790 373 aa6.76□□□□□ -1.33
NPHP3-208ENST00000490993 MED20Q9H944 212 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms