RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 CD53P19397 219 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 NCF2P19878 526 aaPredicted RBP17.52■□□□□ 0.4
SMC4-222ENST00000490207 ACAA2P42765 397 aaKnown RBP17.52■□□□□ 0.4
SMC4-222ENST00000490207 COPZ1P61923 177 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 PDK3Q15120 406 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 TSC22D1Q15714 1073 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 ZNF311Q5JNZ3 666 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 SFRP5Q5T4F7 317 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.52■□□□□ 0.4
SMC4-222ENST00000490207 CLIP4Q8N3C7 705 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 CADM2Q8N3J6 435 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 KISS1RQ969F8 398 aaPredicted RBP17.52■□□□□ 0.4
SMC4-222ENST00000490207 S100PBPQ96BU1 408 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 ZNF775Q96BV0 537 aaPredicted RBP17.52■□□□□ 0.4
SMC4-222ENST00000490207 HDHD5Q9BXW7 423 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 UBTD1Q9HAC8 227 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.52■□□□□ 0.4
SMC4-222ENST00000490207 TRAPPC4Q9Y296 219 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 CHST2Q9Y4C5 530 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 IGKV3D-15A0A087WSY6 115 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 TRBV5-3A0A0A0MS03 114 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.51■□□□□ 0.39
SMC4-222ENST00000490207 ZC3H12DA2A288 527 aaKnown RBP17.51■□□□□ 0.39
SMC4-222ENST00000490207 ZNF716A6NP11 495 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 ZNF814B7Z6K7 855 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 ARAFP10398 606 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 CXCR1P25024 350 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 EDNRAP25101 427 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 MAP2K6P52564 334 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 P2RY6Q15077 328 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 WBP2NLQ6ICG8 309 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 Q6ZT83 130 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 SERPINA11Q86U17 422 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 ZNF100Q8IYN0 542 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 NFKBIDQ8NI38 313 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 SIKE1Q9BRV8 207 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 ADAM19Q9H013 955 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 ZNF385DQ9H6B1 395 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 PRDM4Q9UKN5 801 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 TRIM33Q9UPN9 1127 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 CORO2BQ9UQ03 480 aa17.51■□□□□ 0.39
SMC4-222ENST00000490207 A0A1W2PP18 115 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 KLF4O43474 513 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 IMPDH2P12268 514 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 PRG2P13727 222 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 SLC16A1P53985 500 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 NR1H2P55055 460 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 SLC35A1P78382 337 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 ITGADQ13349 1161 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 BHLHA15Q7RTS1 189 aaPredicted RBP17.5■□□□□ 0.39
SMC4-222ENST00000490207 C10orf111Q8N326 155 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 IKZF5Q9H5V7 419 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 BEX4Q9NWD9 120 aaPredicted RBP17.5■□□□□ 0.39
SMC4-222ENST00000490207 LEF1Q9UJU2 399 aaPredicted RBP17.5■□□□□ 0.39
SMC4-222ENST00000490207 NOSIPQ9Y314 301 aaKnown RBP17.5■□□□□ 0.39
SMC4-222ENST00000490207 GMEB1Q9Y692 573 aa17.5■□□□□ 0.39
SMC4-222ENST00000490207 A0A0G2JND7 137 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 FRS3O43559 492 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 EIF1BO60739 113 aaKnown RBP17.49■□□□□ 0.39
SMC4-222ENST00000490207 RAMP1O60894 148 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 PGM3O95394 542 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 ETS2P15036 469 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 IDUAP35475 653 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 ALKBH2Q6NS38 261 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 DHDDSQ86SQ9 333 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 TGIF2LYQ8IUE0 185 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 CCDC103Q8IW40 242 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 PLPPR2Q96GM1 343 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 CPPED1Q9BRF8 314 aaPredicted RBP17.49■□□□□ 0.39
SMC4-222ENST00000490207 NAA11Q9BSU3 229 aaPredicted RBP17.49■□□□□ 0.39
SMC4-222ENST00000490207 POTEKPQ9BYX7 375 aa17.49■□□□□ 0.39
SMC4-222ENST00000490207 ITPR3Q14573 2671 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 EVPLLA8MZ36 301 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 GPR171O14626 319 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 ANGPT2O15123 496 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 LYZL6O75951 148 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 COX5AP20674 150 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 FPR1P21462 350 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 H3F3AP84243 136 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 CDK6Q00534 326 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 TAB1Q15750 504 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 ACKR1Q16570 336 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 REEP3Q6NUK4 255 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 ZNF704Q6ZNC4 412 aaPredicted RBP17.48■□□□□ 0.39
SMC4-222ENST00000490207 C20orf204Q6ZNR8 217 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 SLC35B4Q969S0 331 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 APH1AQ96BI3 265 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 C3orf49Q96BT1 292 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 CCL19Q99731 98 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 NDUFAF1Q9Y375 327 aa17.48■□□□□ 0.39
SMC4-222ENST00000490207 CNOT4O95628 575 aaKnown RBP17.47■□□□□ 0.39
SMC4-222ENST00000490207 GPIP06744 558 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 GPX2P18283 190 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 PRKAR1BP31321 381 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 BNIP2Q12982 314 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 CEACAM7Q14002 265 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 SCARB2Q14108 478 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 OR7A5Q15622 319 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 PAQR6Q6TCH4 344 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 DLEU7Q6UYE1 221 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms