RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 SERPIND1P05546 499 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 MELTFP08582 738 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 SNRPCP09234 159 aaKnown RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 GTF2E2P29084 291 aaKnown RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 RRM2P31350 389 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 DUSP3P51452 185 aaPredicted RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 CRYBB1P53674 252 aaPredicted RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 OC90Q02509 493 aaPredicted RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 ZFP36L1Q07352 338 aaKnown RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 GK3PQ14409 553 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 SLC5A12Q1EHB4 618 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 C17orf58Q2M2W7 97 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 GLYR1Q49A26 553 aaPredicted RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 VPS26BQ4G0F5 336 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 HIGD2BQ4VC39 106 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 NHLRC3Q5JS37 347 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 AGBL2Q5U5Z8 902 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 TPRA1Q86W33 373 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 TRIM69Q86WT6 500 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 GABRG1Q8N1C3 465 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 SDR9C7Q8NEX9 313 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 OR2L3Q8NG85 312 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 OR7G2Q8NG99 324 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 OR5L2Q8NGL0 311 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 ITLN1Q8WWA0 313 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 BADQ92934 168 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 WBP1Q96G27 269 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 PPP1R16AQ96I34 528 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 RAB34Q9BZG1 259 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 ROGDIQ9GZN7 287 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 SMYD3Q9H7B4 428 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 NHEJ1Q9H9Q4 299 aaPredicted RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 NMRAL1Q9HBL8 299 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 ADGRL4Q9HBW9 690 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 AMBNQ9NP70 447 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 CCNB1IP1Q9NPC3 277 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 NANSQ9NR45 359 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 AGPAT3Q9NRZ7 376 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 PTTG3PQ9NZH4 202 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 NUP50Q9UKX7 468 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 VANGL2Q9ULK5 521 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 BARX2Q9UMQ3 279 aaPredicted RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 AK6Q9Y3D8 172 aaKnown RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 PEX16Q9Y5Y5 336 aa3.91□□□□□ -1.78
CCL20-204ENST00000489160 COL5A2P05997 1499 aaPredicted RBP3.91□□□□□ -1.78
CCL20-204ENST00000489160 MYO15BQ96JP2 1530 aa3.9□□□□□ -1.78
CCL20-204ENST00000489160 LAMC3Q9Y6N6 1575 aa3.9□□□□□ -1.78
CCL20-204ENST00000489160 TRBV11-1A0A0K0K1C0 115 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 LOC100653049A0A140TA62 436 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 SMCO2A6NFE2 343 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 ZNF701M0R085 212 aaPredicted RBP3.9□□□□□ -1.79
CCL20-204ENST00000489160 KIF2AO00139 706 aaPredicted RBP3.9□□□□□ -1.79
CCL20-204ENST00000489160 TRDMT1O14717 391 aaKnown RBP3.9□□□□□ -1.79
CCL20-204ENST00000489160 CLOCKO15516 846 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 TYROBPO43914 113 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 EFNA2O43921 213 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 UGT2B17O75795 530 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 OR2J3O76001 311 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 KRT34O76011 436 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 PLEKP08567 350 aaPredicted RBP3.9□□□□□ -1.79
CCL20-204ENST00000489160 STAG3L2P0CL84 134 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 FOLR2P14207 255 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 SDC1P18827 310 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 PTNP21246 168 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 GSTM3P21266 225 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 YWHABP31946 246 aaKnown RBP3.9□□□□□ -1.79
CCL20-204ENST00000489160 IFNA8P32881 189 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 ELK3P41970 407 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 NAMPTP43490 491 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 RPS5P46782 204 aaKnown RBP3.9□□□□□ -1.79
CCL20-204ENST00000489160 CSNK1EP49674 416 aaKnown RBP3.9□□□□□ -1.79
CCL20-204ENST00000489160 MFAP2P55001 183 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 YWHAGP61981 247 aaKnown RBP eCLIP3.9□□□□□ -1.79
CCL20-204ENST00000489160 RAB40BQ12829 278 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 CUL1Q13616 776 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 NDUFA9Q16795 377 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 TRIM16LQ309B1 348 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 CNPY1Q3B7I2 92 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 NKAIN1Q4KMZ8 207 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 C14orf28Q4W4Y0 310 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 ACER2Q5QJU3 275 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 REG3GQ6UW15 175 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 LRRC31Q6UY01 552 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 LRRC74BQ6ZQY2 392 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 BPIFB2Q8N4F0 458 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 C15orf54Q8N8G6 183 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 OR13F1Q8NGS4 319 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 RFESDQ8TAC1 157 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 MAGEE2Q8TD90 523 aaPredicted RBP3.9□□□□□ -1.79
CCL20-204ENST00000489160 GPX8Q8TED1 209 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 GLYATL2Q8WU03 294 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 MITD1Q8WV92 249 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 STMN2Q93045 179 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 UBE2E3Q969T4 207 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 ATP6V1G3Q96LB4 118 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 MTMR9Q96QG7 549 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 MAPKAP1Q9BPZ7 522 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 TEKT3Q9BXF9 490 aa3.9□□□□□ -1.79
CCL20-204ENST00000489160 IKZF5Q9H5V7 419 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms