RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 RPL29P47914 159 aaKnown RBP2.23□□□□□ -2.05
RFC4-213ENST00000489028 CCT3P49368 545 aaKnown RBP2.23□□□□□ -2.05
RFC4-213ENST00000489028 MRPS11P82912 194 aaKnown RBP2.23□□□□□ -2.05
RFC4-213ENST00000489028 EBI3Q14213 229 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 MXD4Q14582 209 aaPredicted RBP2.23□□□□□ -2.05
RFC4-213ENST00000489028 SSX2Q16385 188 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 NDUFA9Q16795 377 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 LRRC36Q1X8D7 754 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 GGTA1PQ4G0N0 100 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 KCTD21Q4G0X4 260 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 PHYHD1Q5SRE7 291 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 BEND3Q5T5X7 828 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 AGBL2Q5U5Z8 902 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 PVRIGQ6DKI7 326 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 CDH26Q8IXH8 852 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 SLC38A6Q8IZM9 456 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 TMEM123Q8N131 208 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 CLEC4FQ8N1N0 589 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 NECAB1Q8N987 351 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 DCAF4L2Q8NA75 395 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 OR4D5Q8NGN0 318 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 OR1F12Q8NHA8 337 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 M1APQ8TC57 530 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 MAIP1Q8WWC4 291 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 DCUN1D4Q92564 292 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 FGGYQ96C11 551 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 RBM14Q96PK6 669 aaKnown RBP2.23□□□□□ -2.05
RFC4-213ENST00000489028 SMIM14Q96QK8 99 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 OR5B2Q96R09 309 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 CCDC77Q9BR77 488 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 ANP32EQ9BTT0 268 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 SLC25A39Q9BZJ4 359 aaPredicted RBP2.23□□□□□ -2.05
RFC4-213ENST00000489028 VPS37BQ9H9H4 285 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 SGK2Q9HBY8 427 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 TM9SF3Q9HD45 589 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 NANSQ9NR45 359 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 SMOXQ9NWM0 555 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 SEC14L3Q9UDX4 400 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 SAMD4AQ9UPU9 718 aaKnown RBP2.23□□□□□ -2.05
RFC4-213ENST00000489028 RASD1Q9Y272 281 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 PNPLA6Q8IY17 1366 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 ARHGAP21Q5T5U3 1957 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 IGHV1OR15-1A0A075B7D0 117 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 CTAGE15A4D2H0 777 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 HELTA6NFD8 242 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 G3V4G9 280 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 ABCD4O14678 606 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 POLR2DO15514 142 aaKnown RBP2.22□□□□□ -2.05
RFC4-213ENST00000489028 FCMRO60667 390 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 SUPT7LO94864 414 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 F10P00742 488 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 SLC2A3P11169 496 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 CCDC130P13994 396 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 POU2F1P14859 743 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 IMPDH1P20839 514 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 SERPINA2P20848 420 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 GABRR1P24046 479 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 GDI1P31150 447 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 YWHABP31946 246 aaKnown RBP2.22□□□□□ -2.05
RFC4-213ENST00000489028 TAGLN2P37802 199 aaKnown RBP2.22□□□□□ -2.05
RFC4-213ENST00000489028 RPL13AP40429 203 aaKnown RBP2.22□□□□□ -2.05
RFC4-213ENST00000489028 EPS15P42566 896 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 TDO2P48775 406 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 ACTR3P61158 418 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 RAB40BQ12829 278 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 IMMTQ16891 758 aaKnown RBP2.22□□□□□ -2.05
RFC4-213ENST00000489028 SLC5A12Q1EHB4 618 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 TFDP3Q5H9I0 405 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 ZYG11AQ6WRX3 759 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 CTAGE6Q86UF2 777 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 TGIF2LXQ8IUE1 241 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 SKA3Q8IX90 412 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 UBE2J2Q8N2K1 259 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 MTURNQ8N3F0 131 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 ALLCQ8N6M5 410 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 TRPV1Q8NER1 839 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 OR5D13Q8NGL4 314 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 OR8J1Q8NGP2 316 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 AKR7LQ8NHP1 331 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 RNF139Q8WU17 664 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 TRUB1Q8WWH5 349 aaKnown RBP2.22□□□□□ -2.05
RFC4-213ENST00000489028 NT5C3BQ969T7 300 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 PELI1Q96FA3 418 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 SLC35E1Q96K37 410 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 PARD6BQ9BYG5 372 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 MAGT1Q9H0U3 335 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 LRRN3Q9H3W5 708 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 PPDPFQ9H3Y8 114 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 NXF3Q9H4D5 531 aaKnown RBP2.22□□□□□ -2.05
RFC4-213ENST00000489028 RAB18Q9NP72 206 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 FANCFQ9NPI8 374 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 SLC17A5Q9NRA2 495 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 NUDT15Q9NV35 164 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 RIMS3Q9UJD0 308 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 PIGLQ9Y2B2 252 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 ZNFX1Q9P2E3 1918 aaKnown RBP2.22□□□□□ -2.05
RFC4-213ENST00000489028 MYO10Q9HD67 2058 aa2.22□□□□□ -2.05
RFC4-213ENST00000489028 RLFQ13129 1914 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 IGHV7-81A0A0B4J1V7 117 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 A0A0J9YXY3 114 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms