RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 ENPP1P22413 925 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 CTSSP25774 331 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 OR1E2P47887 323 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 DIO1P49895 249 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 CBX1P83916 185 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 MYBPHQ13203 477 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 VTCN1Q7Z7D3 282 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 TSPYL5Q86VY4 417 aaPredicted RBP13.57□□□□□ -0.24
FDPS-213ENST00000489003 LZICQ8WZA0 190 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 SLC38A4Q969I6 547 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 FAM162AQ96A26 154 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 INTS12Q96CB8 462 aaKnown RBP13.57□□□□□ -0.24
FDPS-213ENST00000489003 SLC7A6OSQ96CW6 309 aaPredicted RBP13.57□□□□□ -0.24
FDPS-213ENST00000489003 DDIT4LQ96D03 193 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 DNAJA3Q96EY1 480 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 SLC47A1Q96FL8 570 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 PRRG4Q9BZD6 226 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 UCK2Q9BZX2 261 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 ADPRHL2Q9NX46 363 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 MCTS1Q9ULC4 181 aaKnown RBP13.57□□□□□ -0.24
FDPS-213ENST00000489003 TRAPPC4Q9Y296 219 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 SLC9A8Q9Y2E8 581 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 HDGFL3Q9Y3E1 203 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 DOPEY2Q9Y3R5 2298 aa13.57□□□□□ -0.24
FDPS-213ENST00000489003 SPTBN1Q01082 2364 aaKnown RBP13.57□□□□□ -0.24
FDPS-213ENST00000489003 ELOA3DA6NLF2 546 aaPredicted RBP13.56□□□□□ -0.24
FDPS-213ENST00000489003 CPSF4LA6NMK7 179 aaKnown RBP13.56□□□□□ -0.24
FDPS-213ENST00000489003 SULT2B1O00204 365 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 NPIPB7O75200 414 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 GMNNO75496 209 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 LYPD3O95274 346 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 SYNGR4O95473 234 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 CLDN14O95500 239 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 ZNF682O95780 498 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 THY1P04216 161 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 TMIGD3P0DMS9 266 aaPredicted RBP13.56□□□□□ -0.24
FDPS-213ENST00000489003 CHRNB4P30926 498 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 AGFG1P52594 562 aaKnown RBP13.56□□□□□ -0.24
FDPS-213ENST00000489003 CDH12P55289 794 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 NCALDP61601 193 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 EGR4Q05215 589 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 ELOA3BQ3SY89 546 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 ALG10BQ5I7T1 473 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 PPP4R4Q6NUP7 873 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 ZNF613Q6PF04 617 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 LINC00114Q6XXX2 140 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 ARHGAP24Q8N264 748 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 ELOA3Q8NG57 546 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 CPNE4Q96A23 557 aaPredicted RBP13.56□□□□□ -0.24
FDPS-213ENST00000489003 ZFP3Q96NJ6 502 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 RNF122Q9H9V4 155 aa13.56□□□□□ -0.24
FDPS-213ENST00000489003 DCAF13Q9NV06 445 aaKnown RBP13.56□□□□□ -0.24
FDPS-213ENST00000489003 A0A087WUJ7 227 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 PMS2P2O95744 297 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 CLDN1O95832 211 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 IL18BPO95998 194 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 PNMTP11086 282 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 KLK2P20151 261 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 OR2B6P58173 313 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 CSNK2A1P68400 391 aaPredicted RBP13.55□□□□□ -0.24
FDPS-213ENST00000489003 ZNF239Q16600 458 aaKnown RBP13.55□□□□□ -0.24
FDPS-213ENST00000489003 OR2A2Q6IF42 318 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 RNF217Q8TC41 542 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 STK35Q8TDR2 534 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 ADAMTS16Q8TE57 1224 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 CA5BP1Q8WTZ4 195 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 CLPTM1LQ96KA5 538 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 THTPAQ9BU02 230 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 AMBRA1Q9C0C7 1298 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 SELENONQ9NZV5 590 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 ZNF629Q9UEG4 869 aaPredicted RBP13.55□□□□□ -0.24
FDPS-213ENST00000489003 MAGEL2Q9UJ55 1249 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 RPS6KA6Q9UK32 745 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 PRPF19Q9UMS4 504 aaKnown RBP13.55□□□□□ -0.24
FDPS-213ENST00000489003 SNX13Q9Y5W8 968 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 ICE1Q9Y2F5 2266 aa13.55□□□□□ -0.24
FDPS-213ENST00000489003 IGKV1D-42A0A075B6H8 117 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 IGHV3-15A0A0B4J1V0 119 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 SMAD9O15198 467 aaKnown RBP13.54□□□□□ -0.24
FDPS-213ENST00000489003 GYG2O15488 501 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 CRHP06850 196 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 FCGR2AP12318 317 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 FPR1P21462 350 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 OPRM1P35372 400 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 KIR2DL2P43627 348 aaPredicted RBP13.54□□□□□ -0.24
FDPS-213ENST00000489003 SLC35A1P78382 337 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 MS4A2Q01362 244 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 PIN1Q13526 163 aaPredicted RBP13.54□□□□□ -0.24
FDPS-213ENST00000489003 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 GTF2IRD2BQ6EKJ0 949 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 DEF8Q6ZN54 512 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 FKBP9P1Q75LS8 142 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 FCRLAQ7L513 359 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 GTF2IRD2Q86UP8 949 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 P3H2Q8IVL5 708 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 GCNT2Q8N0V5 402 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 HSH2DQ96JZ2 352 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 NSMCE2Q96MF7 247 aa13.54□□□□□ -0.24
FDPS-213ENST00000489003 PRSS27Q9BQR3 290 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms