RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 RAC1P63000 192 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 CRYZQ08257 329 aaKnown RBP11.1□□□□□ -0.63
TRAIP-209ENST00000488860 DGCR6Q14129 220 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 TMEM176BQ3YBM2 270 aaPredicted RBP11.1□□□□□ -0.63
TRAIP-209ENST00000488860 ZNF324BQ6AW86 544 aaPredicted RBP11.1□□□□□ -0.63
TRAIP-209ENST00000488860 PPP4R4Q6NUP7 873 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 PODNL1Q6PEZ8 512 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 RRM2BQ7LG56 351 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 MEX3DQ86XN8 651 aaKnown RBP11.1□□□□□ -0.63
TRAIP-209ENST00000488860 ZGRF1Q86YA3 2104 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 C10orf53Q8N6V4 93 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 ICA1LQ8NDH6 482 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 ACOT11Q8WXI4 607 aaPredicted RBP11.1□□□□□ -0.63
TRAIP-209ENST00000488860 KLHL15Q96M94 604 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 BBC3Q96PG8 261 aaPredicted RBP11.1□□□□□ -0.63
TRAIP-209ENST00000488860 ANKRD19PQ9H560 264 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 PRDM4Q9UKN5 801 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 MED31Q9Y3C7 131 aa11.1□□□□□ -0.63
TRAIP-209ENST00000488860 EPG5Q9HCE0 2579 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 A0A087WUU8 490 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 A0A1B0GVC2 190 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 SAC3D1A6NKF1 404 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 ENO4A6NNW6 628 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 H0YC42 278 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 LINC01387J3KSC0 135 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 ZNF208O43345 1280 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 OR10H3O60404 316 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 CCNB2O95067 398 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 PRB1P04280 392 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 ZNF23P17027 643 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 GTF2E2P29084 291 aaKnown RBP11.09□□□□□ -0.63
TRAIP-209ENST00000488860 IDUAP35475 653 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 TPD52P55327 224 aaPredicted RBP11.09□□□□□ -0.63
TRAIP-209ENST00000488860 CLDN20P56880 219 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 C19orf57Q0VDD7 668 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 SEC23BQ15437 767 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 KRTCAP3Q53RY4 240 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 C1orf140Q5VVS0 124 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 ARHGAP11AQ6P4F7 1023 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 TBPL2Q6SJ96 375 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 GGNQ86UU5 652 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 NRMQ8IXM6 262 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 PQLC1Q8N2U9 271 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 MEIOBQ8N635 442 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 OR9Q2Q8NGE9 314 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 OR4C15Q8NGM1 316 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 SLC7A13Q8TCU3 470 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 STK35Q8TDR2 534 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 SARAFQ96BY9 339 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 KTI12Q96EK9 354 aaPredicted RBP11.09□□□□□ -0.63
TRAIP-209ENST00000488860 ARL5BQ96KC2 179 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 HS6ST2Q96MM7 605 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 EPYCQ99645 322 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 SLX1AQ9BQ83 275 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 TMEM43Q9BTV4 400 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 BDH2Q9BUT1 245 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 KRCC1Q9NPI7 259 aaPredicted RBP11.09□□□□□ -0.63
TRAIP-209ENST00000488860 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
TRAIP-209ENST00000488860 KMT2BQ9UMN6 2715 aaPredicted RBP11.08□□□□□ -0.64
TRAIP-209ENST00000488860 IGSF10Q6WRI0 2623 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 PRRC2CQ9Y520 2896 aaKnown RBP11.08□□□□□ -0.64
TRAIP-209ENST00000488860 TRAV36DV7A0A075B6V5 113 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 A0A0J9YW62 118 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 SH3PXD2BA1X283 911 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 TPOP07202 933 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 IFI30P13284 250 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 ANPEPP15144 967 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 ABOP16442 354 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 ZNF708P17019 499 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 FPR1P21462 350 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 DNAJA1P31689 397 aaKnown RBP11.08□□□□□ -0.64
TRAIP-209ENST00000488860 PTGS2P35354 604 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 GPR4P46093 362 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 EIF1AXP47813 144 aaKnown RBP11.08□□□□□ -0.64
TRAIP-209ENST00000488860 CLDN18P56856 261 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 OR2B6P58173 313 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 LSM11P83369 360 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAIP-209ENST00000488860 EGR4Q05215 589 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 MYBPHQ13203 477 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 OR7A5Q15622 319 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 NHSL2Q5HYW2 709 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 WLSQ5T9L3 541 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 C1QL3Q5VWW1 255 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 HBMQ6B0K9 141 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 VASNQ6EMK4 673 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 LINC00114Q6XXX2 140 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 ESPNLQ6ZVH7 1005 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 MBOAT2Q6ZWT7 520 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 PRICKLE2Q7Z3G6 844 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 TMEM179BQ7Z7N9 219 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 HS3ST5Q8IZT8 346 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 LSM14AQ8ND56 463 aaKnown RBP11.08□□□□□ -0.64
TRAIP-209ENST00000488860 OR10G2Q8NGC3 310 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 OR4K5Q8NGD3 323 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 OR5M9Q8NGP3 310 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 OR2V1Q8NHB1 315 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 PIGXQ8TBF5 258 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 SDCCAG3Q96C92 435 aa11.08□□□□□ -0.64
TRAIP-209ENST00000488860 SLC25A36Q96CQ1 311 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms