RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CAMK2AQ9UQM7 478 aa14.98□□□□□ -0.01
MCF2L-229ENST00000488765 PLEKHA6Q9Y2H5 1048 aa14.98□□□□□ -0.01
MCF2L-229ENST00000488765 GPR55Q9Y2T6 319 aaPredicted RBP14.98□□□□□ -0.01
MCF2L-229ENST00000488765 PRF1P14222 555 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 AQP2P41181 271 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 STAT5AP42229 794 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 GUCA2AQ02747 115 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 RING1Q06587 406 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 STX4Q12846 297 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 FNDC3BQ53EP0 1204 aaKnown RBP14.97□□□□□ -0.01
MCF2L-229ENST00000488765 EXOSC6Q5RKV6 272 aaKnown RBP14.97□□□□□ -0.01
MCF2L-229ENST00000488765 AADACL4Q5VUY2 407 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 FAM122BQ7Z309 247 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 OR10H5Q8NGA6 315 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 RFKQ969G6 155 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 MRPL38Q96DV4 380 aaKnown RBP14.97□□□□□ -0.01
MCF2L-229ENST00000488765 SLC12A9Q9BXP2 914 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF3P17036 446 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 PNLIPRP2P54317 469 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 KCNAB1Q14722 419 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 MICBQ29980 383 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 PCGF3Q3KNV8 242 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 TMEM69Q5SWH9 247 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 AGTRAPQ6RW13 159 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 BEST3Q8N1M1 668 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 MORN4Q8NDC4 146 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 OR6K3Q8NGY3 331 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 SUCNR1Q9BXA5 334 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 LAT2Q9GZY6 243 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 BRD9Q9H8M2 597 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 FAM86C1Q9NVL1 165 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 TAAR2Q9P1P5 351 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 MBD2Q9UBB5 411 aa14.97□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-229ENST00000488765 A0A1B0GW55 424 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 OR14I1A6ND48 311 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 OR2AT4A6NND4 320 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 CACNB4O00305 520 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-229ENST00000488765 HMGN4O00479 90 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 RAD1O60671 282 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 SC5DO75845 299 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 PCDH8O95206 1070 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DUX4L2P0CJ85 424 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DUX4L3P0CJ86 424 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DUX4L4P0CJ87 422 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DUX4L5P0CJ88 424 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DUX4L6P0CJ89 424 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DUX4L7P0CJ90 424 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 CPT2P23786 658 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 ABCD3P28288 659 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 RAG2P55895 527 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DHODHQ02127 395 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF177Q13360 481 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DYRK1AQ13627 763 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 ODF4Q2M2E3 257 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 TCTN1Q2MV58 587 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF805Q5CZA5 627 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF311Q5JNZ3 666 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 ETFBKMTQ8IXQ9 262 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 SEMA6DQ8NFY4 1073 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 OR51S1Q8NGJ8 323 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 FBXO44Q9H4M3 255 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 CREBZFQ9NS37 354 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 DUX4Q9UBX2 424 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 ENTPD4Q9Y227 616 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 CDHR4A6H8M9 788 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 C5orf52A6NGY3 159 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 A6NLC8 198 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 PRAF2O60831 178 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 PRPH2P23942 346 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 EPHA4P54764 986 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 CBFBQ13951 182 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.96□□□□□ -0.01
MCF2L-229ENST00000488765 MOB3CQ70IA8 216 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 APCDD1Q8J025 514 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 SCAMP4Q969E2 229 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 S100PBPQ96BU1 408 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 SLC38A1Q9H2H9 487 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 KLHL9Q9P2J3 617 aa14.96□□□□□ -0.01
MCF2L-229ENST00000488765 CPED1A4D0V7 1026 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 ARRDC5A6NEK1 342 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 SURF4O15260 269 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 CLDN2P57739 230 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 ZNF234Q14588 700 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 TEAD2Q15562 447 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 DHRS7BQ6IAN0 325 aaPredicted RBP14.96□□□□□ -0.02
MCF2L-229ENST00000488765 FAM71CQ8NEG0 241 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 AKR7LQ8NHP1 331 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 TMED6Q8WW62 240 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 ZNF559Q9BR84 538 aa14.96□□□□□ -0.02
MCF2L-229ENST00000488765 BHLHE41Q9C0J9 482 aaPredicted RBP14.96□□□□□ -0.02
MCF2L-229ENST00000488765 PARP12Q9H0J9 701 aaKnown RBP14.96□□□□□ -0.02
MCF2L-229ENST00000488765 HMSDA8MTL9 139 aa14.95□□□□□ -0.02
MCF2L-229ENST00000488765 IDSB3KWA1 339 aa14.95□□□□□ -0.02
MCF2L-229ENST00000488765 CDC42EP2O14613 210 aa14.95□□□□□ -0.02
MCF2L-229ENST00000488765 NFATC1O95644 943 aa14.95□□□□□ -0.02
MCF2L-229ENST00000488765 MUC1P15941 1255 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-229ENST00000488765 TM4SF4P48230 202 aa14.95□□□□□ -0.02
MCF2L-229ENST00000488765 ECH1Q13011 328 aa14.95□□□□□ -0.02
MCF2L-229ENST00000488765 C1orf94Q6P1W5 598 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms