RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 C5orf58C9J3I9 102 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 PRG2P13727 222 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 NCF2P19878 526 aaPredicted RBP15.73■□□□□ 0.11
ITGB1-215ENST00000488494 PPIBP23284 216 aaKnown RBP15.73■□□□□ 0.11
ITGB1-215ENST00000488494 FKBP2P26885 142 aaKnown RBP15.73■□□□□ 0.11
ITGB1-215ENST00000488494 ACAA2P42765 397 aaKnown RBP15.73■□□□□ 0.11
ITGB1-215ENST00000488494 IRX1P78414 480 aaPredicted RBP15.73■□□□□ 0.11
ITGB1-215ENST00000488494 BEX5Q5H9J7 111 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 SFRP5Q5T4F7 317 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 PRAMEF8Q5VWM4 474 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 PRAMEF7Q5VXH5 474 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 Q6ZT83 130 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 SERPINA11Q86U17 422 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF100Q8IYN0 542 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 C10orf111Q8N326 155 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 NFKBIDQ8NI38 313 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 SPATA9Q9BWV2 254 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 IKZF5Q9H5V7 419 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 BCL2L10Q9HD36 194 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 TMEM181Q9P2C4 612 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 CHST2Q9Y4C5 530 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 PRRC2AP48634 2157 aaKnown RBP15.72■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF716A6NP11 495 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 KLF4O43474 513 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 RAMP1O60894 148 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 IMPDH2P12268 514 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 COPZ1P61923 177 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 P2RY6Q15077 328 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 ZSWIM7Q19AV6 140 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF311Q5JNZ3 666 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 WBP2NLQ6ICG8 309 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 CCDC103Q8IW40 242 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 HDHD5Q9BXW7 423 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 POTEKPQ9BYX7 375 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF385DQ9H6B1 395 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 ARMC7Q9H6L4 198 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF232Q9UNY5 417 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 TRIM33Q9UPN9 1127 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 TRAPPC4Q9Y296 219 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 IFT52Q9Y366 437 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 NF1P21359 2839 aa15.72■□□□□ 0.11
ITGB1-215ENST00000488494 FLNAP21333 2647 aaKnown RBP15.71■□□□□ 0.11
ITGB1-215ENST00000488494 A0A0G2JND7 137 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 A0A1W2PP18 115 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 FRS3O43559 492 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 LYZL6O75951 148 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 PGM3O95394 542 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 IGHV3-9P01782 118 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 ARAFP10398 606 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 CXCR1P25024 350 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 IDUAP35475 653 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 NR1H2P55055 460 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 SLC35A1P78382 337 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 HOXC5Q00444 222 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 ITGADQ13349 1161 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 PDK3Q15120 406 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF704Q6ZNC4 412 aaPredicted RBP15.71■□□□□ 0.11
ITGB1-215ENST00000488494 BHLHA15Q7RTS1 189 aaPredicted RBP15.71■□□□□ 0.11
ITGB1-215ENST00000488494 TGIF2LYQ8IUE0 185 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 APH1AQ96BI3 265 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 PLPPR2Q96GM1 343 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 CPPED1Q9BRF8 314 aaPredicted RBP15.71■□□□□ 0.11
ITGB1-215ENST00000488494 ADAM19Q9H013 955 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 BEX4Q9NWD9 120 aaPredicted RBP15.71■□□□□ 0.11
ITGB1-215ENST00000488494 CORO2BQ9UQ03 480 aa15.71■□□□□ 0.11
ITGB1-215ENST00000488494 NOSIPQ9Y314 301 aaKnown RBP15.71■□□□□ 0.11
ITGB1-215ENST00000488494 EIF1BO60739 113 aaKnown RBP15.7■□□□□ 0.1
ITGB1-215ENST00000488494 COX5AP20674 150 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 FPR1P21462 350 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 ADSLP30566 484 aaPredicted RBP15.7■□□□□ 0.1
ITGB1-215ENST00000488494 MAP2K6P52564 334 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 SLC16A1P53985 500 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 BNIP2Q12982 314 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 CAPRIN1Q14444 709 aaKnown RBP15.7■□□□□ 0.1
ITGB1-215ENST00000488494 TAB1Q15750 504 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 STK11Q15831 433 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 ACKR1Q16570 336 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 DHDDSQ86SQ9 333 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 UBE2J2Q8N2K1 259 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 CCL19Q99731 98 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 SIKE1Q9BRV8 207 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 ZNF446Q9NWS9 450 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 LEF1Q9UJU2 399 aaPredicted RBP15.7■□□□□ 0.1
ITGB1-215ENST00000488494 GMEB1Q9Y692 573 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 MTORP42345 2549 aa15.7■□□□□ 0.1
ITGB1-215ENST00000488494 RAI1Q7Z5J4 1906 aaPredicted RBP15.69■□□□□ 0.1
ITGB1-215ENST00000488494 GPR171O14626 319 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 ANGPT2O15123 496 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 ETS2P15036 469 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 IGHV1-2P23083 117 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 PRKAR1BP31321 381 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 H3F3AP84243 136 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 CDK6Q00534 326 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 FOXD4Q12950 439 aaPredicted RBP15.69■□□□□ 0.1
ITGB1-215ENST00000488494 CEACAM7Q14002 265 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 SCARB2Q14108 478 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 OR7A5Q15622 319 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 REEP3Q6NUK4 255 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 PAQR6Q6TCH4 344 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms