RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 METTL7BQ6UX53 244 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 IL20RBQ6UXL0 311 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 NHLRC1Q6VVB1 395 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SLC36A4Q6YBV0 504 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SMIM5Q71RC9 77 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PLPPR4Q7Z2D5 763 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 GPRIN1Q7Z2K8 1008 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR2W3Q7Z3T1 314 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 BCDIN3DQ7Z5W3 292 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PXKQ7Z7A4 578 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 CLECL1Q8IZS7 167 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 LINC01465Q8N7H1 131 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TEX19Q8NA77 164 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR52N2Q8NGI0 321 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR6X1Q8NH79 312 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 AKR7LQ8NHP1 331 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ASZ1Q8WWH4 475 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 THAP4Q8WY91 577 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MAL2Q969L2 176 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 HIST1H2BAQ96A08 127 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TRIM43Q96BQ3 446 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TEFMQ96QE5 360 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MTERF1Q99551 399 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 COPS8Q99627 209 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MAP3K3Q99759 626 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SSX3Q99909 188 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 DUSP26Q9BV47 211 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TRIM62Q9BVG3 475 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TMED9Q9BVK6 235 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MFFQ9GZY8 342 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FXYD6Q9H0Q3 95 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 POLR2J3Q9H1A7 115 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 P2RY12Q9H244 342 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PRDM13Q9H4Q3 707 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RDH14Q9HBH5 336 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 NT5MQ9NPB1 228 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TMEM138Q9NPI0 162 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MIEF1Q9NQG6 463 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SMCO4Q9NRQ5 59 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MRPL17Q9NRX2 175 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 NFKBIL1Q9UBC1 381 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF69Q9UC07 566 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF282Q9UDV7 671 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FLVCR2Q9UPI3 526 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 EXOGQ9Y2C4 368 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 DHRS7Q9Y394 339 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 IRAK3Q9Y616 596 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 DOCK4Q8N1I0 1966 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 BRWD3Q6RI45 1802 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 C2orf92A0A1B0GVN3 265 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 RNF222A6NCQ9 220 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR6C74A6NCV1 312 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 LRIT2A6NDA9 550 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 GLTPD2A6NH11 291 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 CD8B2A6NJW9 211 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 LOC730098B7Z3J9 87 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 FAM227AF5H4B4 570 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 AP4M1O00189 453 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 RFXAPO00287 272 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 RNASET2O00584 256 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 CLDN4O14493 209 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 YY2O15391 372 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 IRAK2O43187 625 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 RNF13O43567 381 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 TLX2O43763 284 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 TMEM127O75204 238 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 KHDRBS3O75525 346 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 REM1O75628 298 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 GATBO75879 557 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 UBXN7O94888 489 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR2F2O95006 317 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 NDUFB6O95139 128 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 SOX14O95416 240 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 C22orf31O95567 290 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 ACTL6AO96019 429 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 PDYNP01213 254 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 CD8AP01732 235 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 MT-ND4LP03901 98 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 OPN1SWP03999 348 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 ASGR2P07307 311 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 PRSS56P0CW18 603 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 COX7A2P14406 83 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 CBR1P16152 277 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 HIST1H1BP16401 226 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 NDUFB7P17568 137 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 EPORP19235 508 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 CELP19835 753 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 XPAP23025 273 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 AOAHP28039 575 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 OPRD1P41143 372 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 PTGER3P43115 390 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAB5CP51148 216 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 PNLIPRP2P54317 469 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 NRG3P56975 720 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 BLOC1S1P78537 153 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 MRPS10P82664 201 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 HTRA3P83110 453 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 BCL2L1Q07817 233 aa4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 SRSF4Q08170 494 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-213ENST00000488131 SLC10A7Q0GE19 358 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms