RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 AP4B1Q9Y6B7 739 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 SHROOM3Q8TF72 1996 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 A0A1W2PRQ8 180 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 ZNF705GA8MUZ8 300 aaPredicted RBP1.63□□□□□ -2.15
SMC4-219ENST00000487747 LGALS8O00214 317 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 STX7O15400 261 aaKnown RBP1.63□□□□□ -2.15
SMC4-219ENST00000487747 MSH4O15457 936 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 KINO60870 393 aaKnown RBP1.63□□□□□ -2.15
SMC4-219ENST00000487747 CYP2B6P20813 491 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 BTCP35070 178 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 VDAC2P45880 294 aaPredicted RBP1.63□□□□□ -2.15
SMC4-219ENST00000487747 DLX1P56177 255 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 GPRC6AQ5T6X5 926 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 C11orf71Q6IPW1 123 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 CCDC137Q6PK04 289 aaKnown RBP1.63□□□□□ -2.15
SMC4-219ENST00000487747 APTXQ7Z2E3 356 aaKnown RBP1.63□□□□□ -2.15
SMC4-219ENST00000487747 ANKRD37Q7Z713 158 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 ZNF461Q8TAF7 563 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 SYNPRQ8TBG9 265 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 ESR2Q92731 530 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 EEF2KMTQ96G04 330 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 ROGDIQ9GZN7 287 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 ZNF385DQ9H6B1 395 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 SOHLH2Q9NX45 425 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 ZNF222Q9UK12 451 aa1.63□□□□□ -2.15
SMC4-219ENST00000487747 K7EM74 188 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 PRKYO43930 277 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 CBR3O75828 277 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 CENPBP07199 599 aaPredicted RBP1.62□□□□□ -2.15
SMC4-219ENST00000487747 DPP4P27487 766 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 PRKXP51817 358 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 SLC5A12Q1EHB4 618 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 COX19Q49B96 90 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 ZNF311Q5JNZ3 666 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 RAET1LQ5VY80 246 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 ATL3Q6DD88 541 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 C19orf35Q6ZS72 473 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 TAF8Q7Z7C8 310 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 RDH10Q8IZV5 341 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 OR10G3Q8NGC4 313 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 OR51G2Q8NGK0 314 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 DQX1Q8TE96 717 aaKnown RBP1.62□□□□□ -2.15
SMC4-219ENST00000487747 RPL3LQ92901 407 aaKnown RBP1.62□□□□□ -2.15
SMC4-219ENST00000487747 OR10C1Q96KK4 312 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 BMFQ96LC9 184 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 SLC30A2Q9BRI3 323 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 DUSP16Q9BY84 665 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 SELENOIQ9C0D9 397 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 NAT10Q9H0A0 1025 aaKnown RBP1.62□□□□□ -2.15
SMC4-219ENST00000487747 CLMPQ9H6B4 373 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 KCNN3Q9UGI6 736 aa1.62□□□□□ -2.15
SMC4-219ENST00000487747 MPZL1O95297 269 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 IGF1P05019 195 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 RALAP11233 206 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 CALB2P22676 271 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 COL8A2P25067 703 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 CNTN2Q02246 1040 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 PDIA5Q14554 519 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 LRRC10Q5BKY1 277 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 PAQR7Q86WK9 346 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 UBALD2Q8IYN6 164 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 BATF2Q8N1L9 274 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 OSR2Q8N2R0 312 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 C15orf54Q8N8G6 183 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 VSTM2LQ96N03 204 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 NAT9Q9BTE0 207 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 DNTTIP1Q9H147 329 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 TMEM231Q9H6L2 316 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 NOX3Q9HBY0 568 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 SLC40A1Q9NP59 571 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 RNF6Q9Y252 685 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 STRAPQ9Y3F4 350 aaKnown RBP1.61□□□□□ -2.15
SMC4-219ENST00000487747 CUX2O14529 1486 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 RPGRIP1LQ68CZ1 1315 aa1.61□□□□□ -2.15
SMC4-219ENST00000487747 TENM1Q9UKZ4 2725 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 IGHV1OR21-1A0A087WYE8 117 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 B3GAT3O94766 335 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 PPIAL4GP0DN37 164 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 FMO3P31513 532 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 RPA4Q13156 261 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 ZNF620Q6ZNG0 422 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 C16orf62Q7Z3J2 963 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 ANKRD23Q86SG2 305 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 URGCPQ8TCY9 931 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 ST8SIA1Q92185 356 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 RAPGEF5Q92565 580 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 TESK2Q96S53 571 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 P2RY13Q9BPV8 354 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 TBCDQ9BTW9 1192 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 NGBQ9NPG2 151 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 ANO10Q9NW15 660 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 TRAF3IP3Q9Y228 551 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 NUDCQ9Y266 331 aa1.6□□□□□ -2.15
SMC4-219ENST00000487747 ZNF407Q9C0G0 2248 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 ATP10DQ9P241 1426 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 IGHV2-70DA0A0C4DH43 119 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 AGPAT2O15120 278 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 ADRA2AP08913 450 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 LEPP41159 167 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 RFX4Q33E94 735 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms