RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 A8MXQ7 604 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 IDSB3KWA1 339 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 K7N7A8 449 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 ARPC3O15145 178 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 RGS16O15492 202 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 PFKFB2O60825 505 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 KLF8O95600 359 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 IGHV3-48P01763 117 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 KLK3P07288 261 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 MGMTP16455 207 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZNF19P17023 458 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 PAX7P23759 505 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 CMA1P23946 247 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 AQP1P29972 269 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 SHMT2P34897 504 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 MAP3K8P41279 467 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 P2RY1P47900 373 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 CAV2P51636 162 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 EFNB2P52799 333 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 RIPK4P57078 832 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 SLC25A52Q3SY17 297 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 TP53I3Q53FA7 332 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 C11orf71Q6IPW1 123 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 PMF1Q6P1K2 205 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZNF571Q7Z3V5 609 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 TGIF2LXQ8IUE1 241 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 SLC38A6Q8IZM9 456 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 LINC01555Q8NAE3 123 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZNF740Q8NDX6 193 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 STEAP2Q8NFT2 490 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR52I1Q8NGK6 324 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 EMG1Q92979 244 aaKnown RBP2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 ELSPBP1Q96BH3 223 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 TMEM101Q96IK0 257 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 ARHGDIGQ99819 225 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR51J1Q9H342 316 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 LRRN3Q9H3W5 708 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 RBKSQ9H477 322 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 TRAF3IP3Q9Y228 551 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 UGT2A1Q9Y4X1 527 aa2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 TDRD6O60522 2096 aaKnown RBP2.64□□□□□ -1.99
HMGB1P36-201ENST00000487709 A0A1B0GUS0 222 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 FAM231BA6NCW3 169 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 IQCF3P0C7M6 154 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 HNF1AP20823 631 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 GLRA2P23416 452 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 MMP11P24347 488 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 HTR1EP28566 365 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 RDXP35241 583 aaKnown RBP2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 GRIA1P42261 906 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 EPS15P42566 896 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 GLP1RP43220 463 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 CEBPDP49716 269 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 GPM6AP51674 278 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 KPNA2P52292 529 aaKnown RBP2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 GBX2P52951 348 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 MICBQ29980 383 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 KLHL38Q2WGJ6 581 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 PARP15Q460N3 678 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 ANKDD1AQ495B1 522 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 CCDC152Q4G0S7 254 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 TMEM52BQ4KMG9 183 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 TIGD3Q6B0B8 471 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 Q6ZN92 141 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 CEND1Q8N111 149 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZNF540Q8NDQ6 660 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR51S1Q8NGJ8 323 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR56B4Q8NH76 319 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 FBXO30Q8TB52 745 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 PAQR8Q8TEZ7 354 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 CXorf40BQ96DE9 158 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 PELI1Q96FA3 418 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 CCNL2Q96S94 520 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 REEP4Q9H6H4 257 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 FOLH1BQ9HBA9 442 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 AIG1Q9NVV5 245 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 CHRNA9Q9UGM1 479 aa2.63□□□□□ -1.99
HMGB1P36-201ENST00000487709 IGHV1OR21-1A0A087WYE8 117 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 VSTM2BA6NLU5 285 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZNF208O43345 1280 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZNF780AO75290 641 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 DIRAS1O95057 198 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 RBMY1CP0DJD4 496 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 ABOP16442 354 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 POLR2EP19388 210 aaKnown RBP2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 ELK1P19419 428 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 FUT3P21217 361 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 ATP6V1B2P21281 511 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 HMGB2P26583 209 aaKnown RBP2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 CD1BP29016 333 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 GNA11P29992 359 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 HSPA2P54652 639 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 BIDP55957 195 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 TAS2R19P59542 299 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 PSG7Q13046 419 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 IMMTQ16891 758 aaKnown RBP2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 CCDC14Q49A88 953 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 GALNT17Q6IS24 598 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 RGS9BPQ6ZS82 235 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 FAM220AQ7Z4H9 259 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms