RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 PMM1Q92871 262 aa20.85■□□□□ 0.93
PLOD3-215ENST00000487563 GTPBP3Q969Y2 492 aaKnown RBP20.85■□□□□ 0.93
PLOD3-215ENST00000487563 CACYBPQ9HB71 228 aaKnown RBP20.85■□□□□ 0.93
PLOD3-215ENST00000487563 CALML5Q9NZT1 146 aa20.85■□□□□ 0.93
PLOD3-215ENST00000487563 OSGIN1Q9UJX0 560 aa20.85■□□□□ 0.93
PLOD3-215ENST00000487563 USF3Q68DE3 2245 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 CCT8L1PA6NM43 557 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 MRPL33O75394 65 aaKnown RBP20.84■□□□□ 0.93
PLOD3-215ENST00000487563 RAD51DO75771 328 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 CRATP43155 626 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 SLC35A1P78382 337 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 GSTA3Q16772 222 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 ZNF672Q499Z4 452 aaPredicted RBP20.84■□□□□ 0.93
PLOD3-215ENST00000487563 P2RY8Q86VZ1 359 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 CCDC103Q8IW40 242 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 ZNF440Q8IYI8 595 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 LILRB1Q8NHL6 650 aaPredicted RBP20.84■□□□□ 0.93
PLOD3-215ENST00000487563 SMAP2Q8WU79 429 aaPredicted RBP20.84■□□□□ 0.93
PLOD3-215ENST00000487563 NEUROG1Q92886 237 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 TRMT61AQ96FX7 289 aaKnown RBP20.84■□□□□ 0.93
PLOD3-215ENST00000487563 MAELQ96JY0 434 aaKnown RBP20.84■□□□□ 0.93
PLOD3-215ENST00000487563 NAA11Q9BSU3 229 aaPredicted RBP20.84■□□□□ 0.93
PLOD3-215ENST00000487563 ZIM2Q9NZV7 527 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 TRAPPC4Q9Y296 219 aa20.84■□□□□ 0.93
PLOD3-215ENST00000487563 TMEM72A0PK05 275 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 DPRXA6NFQ7 191 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 UBDO15205 165 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 ZNF208O43345 1280 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 EIF1BO60739 113 aaKnown RBP20.83■□□□□ 0.93
PLOD3-215ENST00000487563 BCHEP06276 602 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 SLC1A3P43003 542 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 SLC16A1P53985 500 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 EPS8Q12929 822 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 LIN52Q52LA3 116 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 C6orf10Q5SRN2 563 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 SEZ6L2Q6UXD5 910 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 CASP12Q6UXS9 341 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 ZNF433Q8N7K0 673 aaPredicted RBP20.83■□□□□ 0.93
PLOD3-215ENST00000487563 ITCHQ96J02 903 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 TMBIM4Q9HC24 238 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 SLC6A13Q9NSD5 602 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 ASB6Q9NWX5 421 aa20.83■□□□□ 0.93
PLOD3-215ENST00000487563 TMEM247A6NEH6 219 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 OR5H1A6NKK0 313 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 FAAHO00519 579 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 SOD3P08294 240 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 ETFAP13804 333 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 CRISP3P54108 245 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 DSTNP60981 165 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 MSANTD1Q6ZTZ1 278 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 OR52P1PQ8NH57 321 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 TLCD1Q96CP7 247 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 OR52B2Q96RD2 323 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 ALG2Q9H553 416 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 TPT1P8Q9HAU6 139 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 SDR39U1Q9NRG7 319 aaPredicted RBP20.82■□□□□ 0.92
PLOD3-215ENST00000487563 SLC9A8Q9Y2E8 581 aa20.82■□□□□ 0.92
PLOD3-215ENST00000487563 RAMP1O60894 148 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 PGM3O95394 542 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 ZCCHC18P0CG32 403 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 CXCR1P25024 350 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 POLR2JP52435 117 aaKnown RBP20.81■□□□□ 0.92
PLOD3-215ENST00000487563 MAP2K6P52564 334 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 CDH11P55287 796 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 FAPQ12884 760 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 ZNF836Q6ZNA1 936 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 MAVSQ7Z434 540 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 VRK2Q86Y07 508 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 MIER2Q8N344 545 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 CADM2Q8N3J6 435 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 OR52N5Q8NH56 324 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 TRIM2Q9C040 744 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 RLIMQ9NVW2 624 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 TAS2R16Q9NYV7 291 aa20.81■□□□□ 0.92
PLOD3-215ENST00000487563 MAGED1Q9Y5V3 778 aaPredicted RBP20.81■□□□□ 0.92
PLOD3-215ENST00000487563 ABCD4O14678 606 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 DANCRP0C864 163 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 GKN3PP0CG01 181 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 IMPDH2P12268 514 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 IDUAP35475 653 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 CDKN1AP38936 164 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 COPZ1P61923 177 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 VEZF1Q14119 521 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 LARS2Q15031 903 aaKnown RBP20.8■□□□□ 0.92
PLOD3-215ENST00000487563 GTDC1Q4AE62 458 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 OR9I1Q8NGQ6 314 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 AURKBQ96GD4 344 aaPredicted RBP20.8■□□□□ 0.92
PLOD3-215ENST00000487563 FAIMQ9NVQ4 179 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 PARPBPQ9NWS1 579 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 THUMPD1Q9NXG2 353 aaKnown RBP20.8■□□□□ 0.92
PLOD3-215ENST00000487563 CISD1Q9NZ45 108 aaKnown RBP20.8■□□□□ 0.92
PLOD3-215ENST00000487563 NPAP1Q9NZP6 1156 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 UPB1Q9UBR1 384 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 MALT1Q9UDY8 824 aa20.8■□□□□ 0.92
PLOD3-215ENST00000487563 ZNF443Q9Y2A4 671 aaPredicted RBP20.8■□□□□ 0.92
PLOD3-215ENST00000487563 NSD1Q96L73 2696 aaPredicted RBP20.8■□□□□ 0.92
PLOD3-215ENST00000487563 DSPPQ9NZW4 1301 aa20.79■□□□□ 0.92
PLOD3-215ENST00000487563 ZC3H12DA2A288 527 aaKnown RBP20.79■□□□□ 0.92
PLOD3-215ENST00000487563 CDHR4A6H8M9 788 aa20.79■□□□□ 0.92
PLOD3-215ENST00000487563 NCF2P19878 526 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms