RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 IL23RQ5VWK5 629 aa17■□□□□ 0.31
SMPDL3A-202ENST00000487215 MALRD1Q5VYJ5 2156 aa17■□□□□ 0.31
SMPDL3A-202ENST00000487215 GRINAQ7Z429 371 aa17■□□□□ 0.31
SMPDL3A-202ENST00000487215 LSRQ86X29 649 aaPredicted RBP17■□□□□ 0.31
SMPDL3A-202ENST00000487215 AGR3Q8TD06 166 aa17■□□□□ 0.31
SMPDL3A-202ENST00000487215 SLC35G5Q96KT7 338 aa17■□□□□ 0.31
SMPDL3A-202ENST00000487215 C3orf30Q96M34 536 aa17■□□□□ 0.31
SMPDL3A-202ENST00000487215 UPB1Q9UBR1 384 aa17■□□□□ 0.31
SMPDL3A-202ENST00000487215 MOKQ9UQ07 419 aa17■□□□□ 0.31
SMPDL3A-202ENST00000487215 RNF103-CHMP3A0A140T963 221 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 SMIM23A6NLE4 172 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 KIAA0513O60268 411 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 NPHS1O60500 1241 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 SLU7O95391 586 aaKnown RBP16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 CCNA2P20248 432 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 CLK1P49759 484 aaKnown RBP16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 H3F3AP84243 136 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 TSPO2Q5TGU0 170 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 EMBQ6PCB8 327 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 C16orf62Q7Z3J2 963 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 ADGRG3Q86Y34 549 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 CLECL1Q8IZS7 167 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 FNDC5Q8NAU1 212 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 FOXN4Q96NZ1 517 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 TMEM181Q9P2C4 612 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 SLC35A3Q9Y2D2 325 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 SLC9A8Q9Y2E8 581 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 FLVCR1Q9Y5Y0 555 aa16.99■□□□□ 0.31
SMPDL3A-202ENST00000487215 FKBP2P26885 142 aaKnown RBP16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 ALDH3A1P30838 453 aa16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 SNRPD2P62316 118 aaKnown RBP16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 TGFBR3Q03167 851 aa16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 PLAURQ03405 335 aa16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 CARTPTQ16568 116 aa16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 TYW3Q6IPR3 259 aaKnown RBP16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 GSPT2Q8IYD1 628 aaKnown RBP16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 OR51I1Q9H343 314 aa16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 EXD2Q9NVH0 621 aa16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 PARPBPQ9NWS1 579 aa16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 TRAPPC4Q9Y296 219 aa16.98■□□□□ 0.31
SMPDL3A-202ENST00000487215 LOC390937A0A1W2PQ73 354 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 TGFAP01135 160 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 PGRP06401 933 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 IMPDH2P12268 514 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 MPGP29372 298 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 PRPS1P60891 318 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 SQLEQ14534 574 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 PGS1Q32NB8 556 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 C1QTNF12Q5T7M4 302 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 LIPNQ5VXI9 398 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 ANKS4BQ8N8V4 417 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 EPS8L3Q8TE67 593 aaKnown RBP16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 OIT3Q8WWZ8 545 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 TRIM44Q96DX7 344 aaPredicted RBP16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 SOX7Q9BT81 388 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 MECRQ9BV79 373 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 WDR45Q9Y484 360 aa16.97■□□□□ 0.31
SMPDL3A-202ENST00000487215 CLDN24A6NM45 220 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 SKAP2O75563 359 aaPredicted RBP16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 WNT11O96014 354 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 GUSBP08236 651 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 OR12D1P0DN82 309 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 G6PDP11413 515 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 ZNF23P17027 643 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 SLC35A1P78382 337 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 FUT5Q11128 374 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 SLC17A1Q14916 467 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 CR1LQ2VPA4 569 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 IQCCQ4KMZ1 466 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 AP1ARQ63HQ0 302 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 OR4F3Q6IEY1 312 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 KLHL24Q6TFL4 600 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 HMGN2P46Q86SG4 172 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 MIPOL1Q8TD10 442 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 RAB8BQ92930 207 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 ZG16BQ96DA0 208 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 VRK1Q99986 396 aaPredicted RBP16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 BPESC1Q9GZL8 116 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 MYOZ1Q9NP98 299 aaPredicted RBP16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 EXOSC3Q9NQT5 275 aaKnown RBP16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 POLE3Q9NRF9 147 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 PCDHGB4Q9UN71 923 aa16.96■□□□□ 0.31
SMPDL3A-202ENST00000487215 TMED7-TICAM2A0A0A6YYA0 188 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 IGHV1-18A0A0C4DH31 117 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 KLF11O14901 512 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 EIF1BO60739 113 aaKnown RBP16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 ARRB2P32121 409 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 IDH2P48735 452 aaKnown RBP16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 HIKESHIQ53FT3 197 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 ATAD3BQ5T9A4 648 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 TNFAIP8L2Q6P589 184 aaPredicted RBP16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 FRRS1Q6ZNA5 592 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 ZCCHC23Q6ZST2 131 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 SLC46A3Q7Z3Q1 461 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 ARFGAP2Q8N6H7 521 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 XAGE5Q8WWM1 108 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 TMEM45BQ96B21 275 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 ROPN1LQ96C74 230 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 NAA11Q9BSU3 229 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms