RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CHMP2BQ9UQN3 213 aa3.56□□□□□ -1.84
SNRNP40-205ENST00000486941 ERVK-19Q9WJR5 959 aa3.56□□□□□ -1.84
SNRNP40-205ENST00000486941 PPP2R2CQ9Y2T4 447 aa3.56□□□□□ -1.84
SNRNP40-205ENST00000486941 CHD3Q12873 2000 aaKnown RBP3.56□□□□□ -1.84
SNRNP40-205ENST00000486941 STAB1Q9NY15 2570 aa3.56□□□□□ -1.84
SNRNP40-205ENST00000486941 RAI1Q7Z5J4 1906 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 C2orf92A0A1B0GVN3 265 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 E7ESA3 106 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 K7EPI3 171 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 SAP18O00422 153 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 PLPP1O14494 284 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CASKO14936 926 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 OR10H2O60403 315 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 SH3BGRLO75368 114 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 RCBTB2O95199 551 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 ACTL6AO96019 429 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CLPSP04118 112 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 HEXAP06865 529 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 PCNAP12004 261 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CYP4B1P13584 511 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 DAOP14920 347 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CPN1P15169 458 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 STMN1P16949 149 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 DCTDP32321 178 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 GCKP35557 465 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CASP3P42574 277 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 TMED10P49755 219 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 RAP1GDS1P52306 607 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 NAGLUP54802 743 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 HNRNPH2P55795 449 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 FBXW4P57775 412 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 ACSM2AQ08AH3 577 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 FUT7Q11130 342 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 PDIA2Q13087 525 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CUL3Q13618 768 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 RCAN2Q14206 197 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 OR4D1Q15615 310 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 EIPR1Q53HC9 387 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 FBXO48Q5FWF7 155 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CEP85LQ5SZL2 805 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 LIPJQ5W064 366 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 TIGD3Q6B0B8 471 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 SLC30A6Q6NXT4 461 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 TMEM81Q6P7N7 255 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 SCIMPQ6UWF3 145 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 Q71RC1 249 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 TAOK1Q7L7X3 1001 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 NUP54Q7Z3B4 507 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 ISCA2Q86U28 154 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 LRRC75A-AS1Q8N1F1 130 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 SPATA6LQ8N4H0 392 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 ZNF615Q8N8J6 731 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 FBXO36Q8NEA4 188 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 C17orf47Q8NEP4 570 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 OR7G1Q8NGA0 311 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 HUS1BQ8NHY5 278 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 UBTD2Q8WUN7 234 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CDKL2Q92772 493 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 ABTB1Q969K4 478 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 PIGTQ969N2 578 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 ADIPOR1Q96A54 375 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 TMEM41AQ96HV5 264 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 TXNDC15Q96J42 360 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 RILPQ96NA2 401 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 GAL3ST4Q96RP7 486 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 GPR22Q99680 433 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 PIP5K1AQ99755 562 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 SFXN3Q9BWM7 321 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 RBM24Q9BX46 236 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 ZNF717Q9BY31 904 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 UGT2B28Q9BY64 529 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 OR51B5Q9H339 312 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 PIGMQ9H3S5 423 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CAB39LQ9H9S4 337 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 WDR41Q9HAD4 459 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CXorf21Q9HAI6 301 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 NMRAL1Q9HBL8 299 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 LYARQ9NX58 379 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 TEX10Q9NXF1 929 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 NUDT4Q9NZJ9 180 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 OPTCQ9UBM4 332 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 NDRG3Q9UGV2 375 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 SNX12Q9UMY4 172 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CAMK2AQ9UQM7 478 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 EIF3LQ9Y262 564 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 C15orf41Q9Y2V0 281 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 SLC6A5Q9Y345 797 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 ASB4Q9Y574 426 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 VPS13CQ709C8 3753 aa3.55□□□□□ -1.84
SNRNP40-205ENST00000486941 CADP27708 2225 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 FREM1Q5H8C1 2179 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ALPK2Q86TB3 2170 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 A0A0A6YYD5 115 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 A0A1B0GVY2 172 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 A0A1W2PPR1 153 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 CCDC189A1A4V9 331 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 MAGEA13PA6NCF6 341 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 GLOD5A6NK44 160 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 WASHC1A8K0Z3 465 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 A8MXE2 369 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms