RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 C11orf88Q6PI97 169 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 UQCC3Q6UW78 93 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 OR2W3Q7Z3T1 314 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF433Q8N7K0 673 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 CHST14Q8NCH0 376 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 TMIEQ8NEW7 156 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 OR1S2Q8NGQ3 325 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF75AQ96N20 296 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 NRTNQ99748 197 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 MS4A8Q9BY19 250 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 TINAGL1Q9GZM7 467 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SLC25A18Q9H1K4 315 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 GAREM1Q9H706 876 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM185BQ9H7F4 350 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 CACYBPQ9HB71 228 aaKnown RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 NOX4Q9NPH5 578 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 MARCH5Q9NX47 278 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SPG21Q9NZD8 308 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 GPN3Q9UHW5 284 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF230Q9UIE0 474 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 FEZF1A0PJY2 475 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PIN1P1O15428 100 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SSX5O60225 188 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SLC25A12O75746 678 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SNAPINO95295 136 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 F12P00748 615 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 CLTBP09497 229 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 MAKP20794 623 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 MAGEB1P43366 347 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 LUMP51884 338 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 RGS8P57771 180 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 FOXK2Q01167 660 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 CDK5R1Q15078 307 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PAN3Q58A45 887 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 RBMS3Q6XE24 437 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 ARMC10Q8N2F6 343 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 ARL14Q8N4G2 192 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 CYB561A3Q8NBI2 242 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 OR6S1Q8NH40 331 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 THAP6Q8TBB0 222 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 RXFP4Q8TDU9 374 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 C2orf15Q8WU43 125 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 TNFAIP8L1Q8WVP5 186 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 TIFAQ96CG3 184 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SMIM19Q96E16 107 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PELI1Q96FA3 418 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PDCD1LG2Q9BQ51 273 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 TRMT61BQ9BVS5 477 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 CHST6Q9GZX3 395 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SPHK1Q9NYA1 384 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PLAGL1Q9UM63 463 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PCDHB10Q9UN67 800 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 DENND4CQ5VZ89 1909 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SCN10AQ9Y5Y9 1956 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 COL4A3Q01955 1670 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 MEX3AA1L020 520 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 ACOT7O00154 380 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PPM1DO15297 605 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PAK4O96013 591 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PTGFRP43088 359 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SNRPEP62304 92 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PPIAP62937 165 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 TGM3Q08188 693 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 RBMS2Q15434 407 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 MPPED2Q15777 294 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 FAM110CQ1W6H9 321 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PRAMEF14Q5SWL7 426 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 AVPI1Q5T686 147 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PWWP2BQ6NUJ5 590 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 JMJD6Q6NYC1 403 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 FUT10Q6P4F1 479 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 THSD4Q6ZMP0 1018 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SLC24A5Q71RS6 500 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 C11orf96Q7Z7L8 435 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 LNX2Q8N448 690 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 TRAM1L1Q8N609 369 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 OR52L1Q8NGH7 329 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 LINC01599Q8WXQ3 324 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PDCD10Q9BUL8 212 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 PTDSS2Q9BVG9 487 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 CMC2Q9NRP2 79 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 SIDT1Q9NXL6 827 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 MYEF2Q9P2K5 600 aaKnown RBP9.82□□□□□ -0.84
CCDC171-208ENST00000486641 OR5V1Q9UGF6 321 aa9.82□□□□□ -0.84
CCDC171-208ENST00000486641 A0A0D9SG52 128 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 TRBV2A0A0J9YWF9 115 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM200CA6NKL6 621 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 KIAA0355O15063 1070 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 FCMRO60667 390 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 EIF1BO60739 113 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 CKMP06732 381 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF806P0C7X5 589 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 TMIGD3P0DMS9 266 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 BMP7P18075 431 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 LAG3P18627 525 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 SLC2A5P22732 501 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 BDKRB2P30411 391 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 EIF1P41567 113 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms