RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 VNN3Q9NY84 501 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 CRIM1Q9NZV1 1036 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC13A4Q9UKG4 626 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TMCC3Q9ULS5 477 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 SH3GLB1Q9Y371 365 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 U3KQV3 271 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 MED12Q93074 2177 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 E9PQ18 207 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 FAAHO00519 579 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 HCN1O60741 890 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 WDR1O75083 606 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 CTAG2O75638 210 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 CCNB2O95067 398 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 OPN1SWP03999 348 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 TFAP2AP05549 437 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 THBS1P07996 1170 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 GNAO1P09471 354 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 ALOX5P09917 674 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 CCDC159P0C7I6 412 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 NT5EP21589 574 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 BMP5P22003 454 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 PRKACGP22612 351 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 PTGDSP41222 190 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 DAPP51397 102 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF136P52737 540 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 ESRRGP62508 458 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 LTB4RQ15722 352 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 SYPL1Q16563 259 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 DUSP7Q16829 419 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 ZIK1Q3SY52 487 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 GPAT3Q53EU6 434 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF691Q5VV52 312 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 YRDCQ86U90 279 aaKnown RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC44A2Q8IWA5 706 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 PEX5LQ8IYB4 626 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC15A4Q8N697 577 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 SMYD1Q8NB12 490 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 CHDHQ8NE62 594 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 OR7G2Q8NG99 324 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 GPR32P1Q8NGA4 272 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 OR10G2Q8NGC3 310 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 LINC01560Q8TB33 94 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 OIT3Q8WWZ8 545 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF566Q969W8 418 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 CTHRC1Q96CG8 243 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 NTNG2Q96CW9 530 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 NODALQ96S42 347 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 PITX2Q99697 317 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 NXF5Q9H1B4 397 aaKnown RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 OR10A5Q9H207 317 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 GSX1Q9H4S2 264 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 ARMC7Q9H6L4 198 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 GALNT9Q9HCQ5 603 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 VCX3AQ9NNX9 186 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 ACKR4Q9NPB9 350 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 PAPOLBQ9NRJ5 636 aaKnown RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 KCNN3Q9UGI6 736 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 NDRG4Q9ULP0 352 aaKnown RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 BOKQ9UMX3 212 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 MGAT4BQ9UQ53 548 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 TESMINQ9Y4I5 508 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 MAGED1Q9Y5V3 778 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 NPFFR2Q9Y5X5 522 aa8.5□□□□□ -1.05
TMEM39A-208ENST00000486159 A0A1W2PRQ8 180 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 PRAMEF27A3QJZ7 478 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 B4DXG7 233 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 DIRAS1O95057 198 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ADAP00813 363 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 H1F0P07305 194 aaKnown RBP8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 CHRM4P08173 479 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 LINGO3P0C6S8 592 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 BMP7P18075 431 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 TCEA1P23193 301 aaKnown RBP8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 CEACAM8P31997 349 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 MAP3K8P41279 467 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 CASP3P42574 277 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 OR1E2P47887 323 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ALDH3B2P48448 385 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 CDH12P55289 794 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 FUT7Q11130 342 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 FOXF2Q12947 444 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 NPRL3Q12980 569 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 DGCR6Q14129 220 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 LARS2Q15031 903 aaKnown RBP8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNHIT3Q15649 155 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 PRICKLE4Q2TBC4 344 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ACSF3Q4G176 576 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF311Q5JNZ3 666 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 RPS26P11Q5JNZ5 115 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 C6orf141Q5SZD1 244 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 RIPPLY2Q5TAB7 128 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ALDH16A1Q8IZ83 802 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 HS3ST5Q8IZT8 346 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 TAGAPQ8N103 731 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 DEPDC4Q8N2C3 294 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF511Q8NB15 262 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 OR5D16Q8NGK9 328 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 KAT2AQ92830 837 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 DGCR14Q96DF8 476 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms