RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 MYPOPQ86VE0 399 aaPredicted RBP9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 SLC22A9Q8IVM8 553 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 OR5D16Q8NGK9 328 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 OR2T11Q8NH01 316 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 CLDND2Q8NHS1 167 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 UBASH3BQ8TF42 649 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 TMEM234Q8WY98 164 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 SDF2Q99470 211 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 KCNS3Q9BQ31 491 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 KATNB1Q9BVA0 655 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 RBM4Q9BWF3 364 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 CDC42EP4Q9H3Q1 356 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 TPK1Q9H3S4 243 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 ESM1Q9NQ30 184 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 C1orf109Q9NX04 203 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 CHRNA9Q9UGM1 479 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 ZNF180Q9UJW8 692 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 USP22Q9UPT9 525 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 SLC9A8Q9Y2E8 581 aa9.41□□□□□ -0.9
SMARCC1-205ENST00000483847 DNPH1O43598 174 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 FCMRO60667 390 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 CRCPO75575 148 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 UGT2B17O75795 530 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 LGI1O95970 557 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 CSTAP01040 98 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 MSMBP08118 114 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 CELA3BP08861 270 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 SNRPAP09012 282 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 APOBEC1P41238 236 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 CCT3P49368 545 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 RPS26P62854 115 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 RPL38P63173 70 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 IL1RL1Q01638 556 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 SLC17A1Q14916 467 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 GPR68Q15743 365 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 ZNF141Q15928 474 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 ADRM1Q16186 407 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 MIDNQ504T8 468 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 ATP6AP1LQ52LC2 224 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 RFTN2Q52LD8 501 aaPredicted RBP9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 UGT2A3Q6UWM9 527 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 USP43Q70EL4 1123 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 SPATA21Q7Z572 469 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 ADGRG3Q86Y34 549 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 CDK20Q8IZL9 346 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 ZIC4Q8N9L1 334 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 OR7A2PQ8NGA2 310 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 BOD1Q96IK1 185 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 LRRC37BQ96QE4 947 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 OR7D2Q96RA2 312 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 ZNF747Q9BV97 191 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 SERHL2Q9H4I8 314 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 PARPBPQ9NWS1 579 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 FAF1Q9UNN5 650 aaPredicted RBP9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 HDGFL3Q9Y3E1 203 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 PCDHB14Q9Y5E9 798 aa9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 SPIN1Q9Y657 262 aaPredicted RBP9.4□□□□□ -0.9
SMARCC1-205ENST00000483847 LOC105371242A0A075B767 164 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 URI1O94763 535 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 ERCC1P07992 297 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 ADRA2AP08913 450 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 LAMP1P11279 417 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 IMPDH2P12268 514 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 NPR2P20594 1047 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 RYKP34925 604 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 KHKP50053 298 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 MAPK14Q16539 360 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 C1QTNF12Q5T7M4 302 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 FAHD2BQ6P2I3 314 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 TREML4Q6UXN2 200 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 LINGO2Q7L985 606 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 RELL1Q8IUW5 271 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 ZDHHC22Q8N966 263 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 FAM71CQ8NEG0 241 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 OR56A1Q8NGH5 318 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 OR1K1Q8NGR3 316 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 OR5AK3PQ8NH89 298 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 BCL2L2Q92843 193 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 AURKBQ96GD4 344 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 FAHD2AQ96GK7 314 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 METTL2AQ96IZ6 378 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 ZNF385AQ96PM9 386 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 SLC6A7Q99884 636 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 NMUR2Q9GZQ4 415 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 RACGAP1Q9H0H5 632 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 ZNF442Q9H7R0 627 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 DYNLRB1Q9NP97 96 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 TREM2Q9NZC2 230 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 TMEM181Q9P2C4 612 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 CRNNQ9UBG3 495 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 MKLN1Q9UL63 735 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 EMCNQ9ULC0 261 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 GRIP1Q9Y3R0 1128 aa9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 NUP214P35658 2090 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-205ENST00000483847 A0A096LPE4 126 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 A0A1W2PPZ6 126 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 G3V2L1 256 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 C6orf47O95873 294 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 IGLV1-44P01699 117 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms