RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 SELENONQ9NZV5 590 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 JKAMPQ9P055 326 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 TMEM181Q9P2C4 612 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 PACSIN3Q9UKS6 424 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 BAG5Q9UL15 447 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 EMC9Q9Y3B6 208 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 A8MVM7 634 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 GSTA4O15217 222 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 FMO6PO60774 539 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 HTR2AP28223 471 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 KDELR2P33947 212 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 CTBP2P56545 445 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 SIRPAP78324 504 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 GUSBP1Q15486 140 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 FBXL19-AS1Q494R0 122 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 ULK3Q6PHR2 472 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 ATG4DQ86TL0 474 aaPredicted RBP18.69■□□□□ 0.58
SEC13-217ENST00000482647 BCAS4Q8TDM0 211 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 RNF128Q8TEB7 428 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 PROX1Q92786 737 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 STARD4Q96DR4 205 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 ZHX1-C8orf76Q96EF9 292 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 KCTD14Q9BQ13 255 aaPredicted RBP18.69■□□□□ 0.58
SEC13-217ENST00000482647 PRR14Q9BWN1 585 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 C12orf10Q9HB07 376 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 NPDC1Q9NQX5 325 aaPredicted RBP18.69■□□□□ 0.58
SEC13-217ENST00000482647 ADA2Q9NZK5 511 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 ABCD2Q9UBJ2 740 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 ARHGAP21Q5T5U3 1957 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 KIAA1549Q9HCM3 1950 aa18.69■□□□□ 0.58
SEC13-217ENST00000482647 A0A1B0GWA3 101 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 ELOA3DA6NLF2 546 aaPredicted RBP18.68■□□□□ 0.58
SEC13-217ENST00000482647 M0R3H8 397 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 DNPH1O43598 174 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 SS18L1O75177 396 aaPredicted RBP18.68■□□□□ 0.58
SEC13-217ENST00000482647 PNMTP11086 282 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 GSK3BP49841 420 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 SLC35A1P78382 337 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 OR1Q1Q15612 314 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 NRF1Q16656 503 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 ELOA3BQ3SY89 546 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 LRRC23Q53EV4 343 aaPredicted RBP18.68■□□□□ 0.58
SEC13-217ENST00000482647 CYBRD1Q53TN4 286 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 ALG10BQ5I7T1 473 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 BTLAQ7Z6A9 289 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 ELOA3Q8NG57 546 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 RNASE6Q93091 150 aaKnown RBP18.68■□□□□ 0.58
SEC13-217ENST00000482647 NSL1Q96IY1 281 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 SPOCK3Q9BQ16 436 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 WFDC6Q9BQY6 131 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 GP6Q9HCN6 339 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 NDE1Q9NXR1 346 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 FOXD3Q9UJU5 478 aaPredicted RBP18.68■□□□□ 0.58
SEC13-217ENST00000482647 CLEC4AQ9UMR7 237 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 SLC9A8Q9Y2E8 581 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 CENPEQ02224 2701 aa18.68■□□□□ 0.58
SEC13-217ENST00000482647 CRYBG3Q68DQ2 2970 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 DOCK7Q96N67 2140 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 ZC3H12DA2A288 527 aaKnown RBP18.67■□□□□ 0.58
SEC13-217ENST00000482647 TPST2O60704 377 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 SMNDC1O75940 238 aaKnown RBP eCLIP18.67■□□□□ 0.58
SEC13-217ENST00000482647 COX6B1P14854 86 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 UQCRC1P31930 480 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 OR2B6P58173 313 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 MXRA7P84157 204 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 BNIP2Q12982 314 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 VWA1Q6PCB0 445 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 C6orf89Q6UWU4 347 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 OR6T1Q8NGN1 323 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 VANGL1Q8TAA9 524 aaPredicted RBP18.67■□□□□ 0.58
SEC13-217ENST00000482647 STK35Q8TDR2 534 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 ABHD3Q8WU67 409 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 SLC47A1Q96FL8 570 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 MCHR1Q99705 422 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 TACO1Q9BSH4 297 aaKnown RBP18.67■□□□□ 0.58
SEC13-217ENST00000482647 ENKD1Q9H0I2 346 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 GMPR2Q9P2T1 348 aaKnown RBP18.67■□□□□ 0.58
SEC13-217ENST00000482647 PROCRQ9UNN8 238 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 SH3GLB1Q9Y371 365 aa18.67■□□□□ 0.58
SEC13-217ENST00000482647 IGHV3-15A0A0B4J1V0 119 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 TMEM229AB2RXF0 380 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 CXCR6O00574 342 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 MSTNO14793 375 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 SMAD9O15198 467 aaKnown RBP18.66■□□□□ 0.58
SEC13-217ENST00000482647 HNRNPRO43390 633 aaKnown RBP18.66■□□□□ 0.58
SEC13-217ENST00000482647 EIF1BO60739 113 aaKnown RBP18.66■□□□□ 0.58
SEC13-217ENST00000482647 CYTIPO60759 359 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 GPIP06744 558 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 YES1P07947 543 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 CD8BP10966 210 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 IDUAP35475 653 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 TMEM201Q5SNT2 666 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 C16orf89Q6UX73 402 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 LUZP2Q86TE4 346 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 PGAM4Q8N0Y7 254 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 OR6K3Q8NGY3 331 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 RNF217Q8TC41 542 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 LZICQ8WZA0 190 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 DNAJA3Q96EY1 480 aa18.66■□□□□ 0.58
SEC13-217ENST00000482647 ADPRHL2Q9NX46 363 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms