RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 ZSWIM7Q19AV6 140 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 ALKBH2Q6NS38 261 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 ZNF836Q6ZNA1 936 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 BHLHA15Q7RTS1 189 aaPredicted RBP20.12■□□□□ 0.81
CYTH3-208ENST00000482460 KRTAP1-3Q8IUG1 177 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 DYDC1Q8WWB3 177 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 TMEM19Q96HH6 336 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 NGBQ9NPG2 151 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 ZNF232Q9UNY5 417 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 ZNF443Q9Y2A4 671 aaPredicted RBP20.12■□□□□ 0.81
CYTH3-208ENST00000482460 NOSIPQ9Y314 301 aaKnown RBP20.12■□□□□ 0.81
CYTH3-208ENST00000482460 VPS13CQ709C8 3753 aa20.12■□□□□ 0.81
CYTH3-208ENST00000482460 GPR171O14626 319 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 THBS1P07996 1170 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 GKN3PP0CG01 181 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 HOXB9P17482 250 aaPredicted RBP20.11■□□□□ 0.81
CYTH3-208ENST00000482460 ACAA2P42765 397 aaKnown RBP20.11■□□□□ 0.81
CYTH3-208ENST00000482460 H3F3AP84243 136 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 FADDQ13158 208 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 RNF220Q5VTB9 566 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 BLOC1S3Q6QNY0 202 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 HDXQ7Z353 690 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 P3H2Q8IVL5 708 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 FUNDC1Q8IVP5 155 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 CCDC103Q8IW40 242 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 GOLGA6L1Q8N7Z2 621 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 IFT52Q9Y366 437 aa20.11■□□□□ 0.81
CYTH3-208ENST00000482460 SETD2Q9BYW2 2564 aaPredicted RBP20.11■□□□□ 0.81
CYTH3-208ENST00000482460 A0A096LPI6 279 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 HMGB1P1B2RPK0 211 aaPredicted RBP20.1■□□□□ 0.81
CYTH3-208ENST00000482460 EIF1BO60739 113 aaKnown RBP20.1■□□□□ 0.81
CYTH3-208ENST00000482460 LYZL6O75951 148 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 BMP2P12643 396 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 SLC16A1P53985 500 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 AQP5P55064 265 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 SLC35A1P78382 337 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 RPS26P11Q5JNZ5 115 aaPredicted RBP20.1■□□□□ 0.81
CYTH3-208ENST00000482460 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.1■□□□□ 0.81
CYTH3-208ENST00000482460 CLIP4Q8N3C7 705 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 SPATA9Q9BWV2 254 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 POTEKPQ9BYX7 375 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 ARMC7Q9H6L4 198 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 CACYBPQ9HB71 228 aaKnown RBP20.1■□□□□ 0.81
CYTH3-208ENST00000482460 INTS9Q9NV88 658 aaKnown RBP20.1■□□□□ 0.81
CYTH3-208ENST00000482460 CCDC167Q9P0B6 97 aa20.1■□□□□ 0.81
CYTH3-208ENST00000482460 FLNAP21333 2647 aaKnown RBP20.1■□□□□ 0.81
CYTH3-208ENST00000482460 HS3ST1O14792 307 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 IMPDH2P12268 514 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 COX5AP20674 150 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 IGHV1-2P23083 117 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 CXCR1P25024 350 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 COPZ1P61923 177 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 IRX1P78414 480 aaPredicted RBP20.09■□□□□ 0.81
CYTH3-208ENST00000482460 CAPRIN1Q14444 709 aaKnown RBP20.09■□□□□ 0.81
CYTH3-208ENST00000482460 NCMAPQ5T1S8 102 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 LRIF1Q5T3J3 769 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 PRAMEF8Q5VWM4 474 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 PRAMEF7Q5VXH5 474 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 FBXW9Q5XUX1 488 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 WBP2NLQ6ICG8 309 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 SPDL1Q96EA4 605 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 NAA11Q9BSU3 229 aaPredicted RBP20.09■□□□□ 0.81
CYTH3-208ENST00000482460 ESRP2Q9H6T0 727 aaKnown RBP20.09■□□□□ 0.81
CYTH3-208ENST00000482460 VIPAS39Q9H9C1 493 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 BCL2L10Q9HD36 194 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 A4GALTQ9NPC4 353 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 SLC52A3Q9NQ40 469 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 TMEM45AQ9NWC5 275 aa20.09■□□□□ 0.81
CYTH3-208ENST00000482460 ZC3H12DA2A288 527 aaKnown RBP20.08■□□□□ 0.81
CYTH3-208ENST00000482460 RAMP1O60894 148 aa20.08■□□□□ 0.81
CYTH3-208ENST00000482460 NUDT7P0C024 238 aa20.08■□□□□ 0.81
CYTH3-208ENST00000482460 ZNF611Q8N823 705 aa20.08■□□□□ 0.81
CYTH3-208ENST00000482460 IGFBPL1Q8WX77 278 aa20.08■□□□□ 0.81
CYTH3-208ENST00000482460 APH1AQ96BI3 265 aa20.08■□□□□ 0.81
CYTH3-208ENST00000482460 ARGLU1Q9NWB6 273 aaPredicted RBP20.08■□□□□ 0.81
CYTH3-208ENST00000482460 SLC25A37Q9NYZ2 338 aa20.08■□□□□ 0.81
CYTH3-208ENST00000482460 CHST2Q9Y4C5 530 aa20.08■□□□□ 0.81
CYTH3-208ENST00000482460 NR5A2O00482 541 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 MRPL33O75394 65 aaKnown RBP20.07■□□□□ 0.8
CYTH3-208ENST00000482460 PGM3O95394 542 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 NTF4P34130 210 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 ATP4BP51164 291 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 ZNF311Q5JNZ3 666 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 Q5PR19 223 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 TIMM23BQ5SRD1 257 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 ADAM5Q6NVV9 412 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 PAQR6Q6TCH4 344 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 PRSS57Q6UWY2 283 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 SSX8Q7RTT4 187 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 P2RY8Q86VZ1 359 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 MSRB3Q8IXL7 192 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 UBE2J2Q8N2K1 259 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 CADM2Q8N3J6 435 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 ZNF433Q8N7K0 673 aaPredicted RBP20.07■□□□□ 0.8
CYTH3-208ENST00000482460 BBS10Q8TAM1 723 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 CKAP2Q8WWK9 683 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 AKAP1Q92667 903 aaKnown RBP eCLIP20.07■□□□□ 0.8
CYTH3-208ENST00000482460 MAL2Q969L2 176 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 MUCL1Q96DR8 90 aa20.07■□□□□ 0.8
CYTH3-208ENST00000482460 SLAMF8Q9P0V8 285 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms