RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 KRCC1Q9NPI7 259 aaPredicted RBP13.25□□□□□ -0.29
CHD3-211ENST00000481999 FBXL4Q9UKA2 621 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 EXOGQ9Y2C4 368 aaKnown RBP13.25□□□□□ -0.29
CHD3-211ENST00000481999 CDH10Q9Y6N8 788 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 A0A1B0GX78 115 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 MEIOCA2RUB1 952 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 CCDC182A6NF36 153 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 SOCS6O14544 535 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 CASKO14936 926 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 AK1P00568 194 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 CSTAP01040 98 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 HLA-DPB1P04440 258 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 HMGN1P05114 100 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 TBXA2RP21731 343 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 HTR1FP30939 366 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 DDOSTP39656 456 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 ACSM1Q08AH1 577 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 FGFBP1Q14512 234 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 PYDC2Q56P42 97 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 WDR74Q6RFH5 385 aaPredicted RBP13.24□□□□□ -0.29
CHD3-211ENST00000481999 COX15Q7KZN9 410 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 C9orf40Q8IXQ3 194 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 PSD4Q8NDX1 1056 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 OR2T33Q8NG76 320 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 OR4C6Q8NH72 309 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 FANK1Q8TC84 345 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 ZNF721Q8TF20 911 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 THAP3Q8WTV1 239 aaPredicted RBP13.24□□□□□ -0.29
CHD3-211ENST00000481999 CHRNA10Q9GZZ6 450 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 UBQLN3Q9H347 655 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 TP63Q9H3D4 680 aaPredicted RBP13.24□□□□□ -0.29
CHD3-211ENST00000481999 ZNF768Q9H5H4 540 aaKnown RBP13.24□□□□□ -0.29
CHD3-211ENST00000481999 SERTAD3Q9UJW9 196 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 RGS13O14921 159 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 IDH3BO43837 385 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 IGHA1P01876 353 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 CLUP10909 449 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 IFITM2Q01629 132 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 LCN10Q6JVE6 187 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 PWWP2BQ6NUJ5 590 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 OR52N1Q8NH53 320 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 SNX18Q96RF0 628 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 SLC7A5P2Q9GIP4 190 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 HINT3Q9NQE9 182 aaKnown RBP13.24□□□□□ -0.29
CHD3-211ENST00000481999 H2AFY2Q9P0M6 372 aaPredicted RBP13.24□□□□□ -0.29
CHD3-211ENST00000481999 N6AMT1Q9Y5N5 214 aa13.24□□□□□ -0.29
CHD3-211ENST00000481999 IGHV5-10-1A0A0J9YXX1 117 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 FAM86C2PA6NEL3 165 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 HMX3A6NHT5 357 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 LALBAP00709 142 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 IGKV3-11P04433 115 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 ATP6V1E1P36543 226 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 ATP12AP54707 1039 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 CRYZQ08257 329 aaKnown RBP13.23□□□□□ -0.29
CHD3-211ENST00000481999 C1orf210Q8IVY1 113 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 ARIH2OSQ8N7S6 290 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 ZFP41Q8N8Y5 198 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 CYB561A3Q8NBI2 242 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 GTPBP2Q9BX10 602 aaKnown RBP13.23□□□□□ -0.29
CHD3-211ENST00000481999 JAM3Q9BX67 310 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 C11orf54Q9H0W9 315 aaPredicted RBP13.23□□□□□ -0.29
CHD3-211ENST00000481999 PRMT8Q9NR22 394 aaPredicted RBP13.23□□□□□ -0.29
CHD3-211ENST00000481999 DDX28Q9NUL7 540 aaKnown RBP13.23□□□□□ -0.29
CHD3-211ENST00000481999 MED12Q93074 2177 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 LAMA5O15230 3695 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 SMIM30A4D0T7 59 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 TTC36A6NLP5 189 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 IMPA2O14732 288 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 TFECO14948 347 aaPredicted RBP13.23□□□□□ -0.29
CHD3-211ENST00000481999 GYPBP06028 91 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 NOS3P29474 1203 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 SERTAD2Q14140 314 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 ZFP69Q49AA0 526 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 PLBD1Q6P4A8 553 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 TMEM71Q6P5X7 295 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 PRSS42Q7Z5A4 293 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 CPOQ8IVL8 374 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 RDH10Q8IZV5 341 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 DEPDC7Q96QD5 511 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 TMEM27Q9HBJ8 222 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 ZFHX4Q86UP3 3567 aa13.23□□□□□ -0.29
CHD3-211ENST00000481999 TCRBV16S1A1N1A0A5B0 115 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 SERINC4A6NH21 518 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 UNC119BA6NIH7 251 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 HCN1O60741 890 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 ICOSLGO75144 302 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 CELP19835 753 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 S100A1P23297 94 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 MST1P26927 711 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 NR0B1P51843 470 aaKnown RBP13.22□□□□□ -0.29
CHD3-211ENST00000481999 ZNF141Q15928 474 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 LCN1P1Q5VSP4 162 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 METAP1DQ6UB28 335 aaPredicted RBP13.22□□□□□ -0.29
CHD3-211ENST00000481999 TMEM105Q8N8V8 129 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 PHOSPHO1Q8TCT1 267 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 ADAMTS18Q8TE60 1221 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 ST6GAL2Q96JF0 529 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 TNFRSF13CQ96RJ3 184 aa13.22□□□□□ -0.29
CHD3-211ENST00000481999 SECISBP2Q96T21 854 aaKnown RBP13.22□□□□□ -0.29
CHD3-211ENST00000481999 TMED9Q9BVK6 235 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms