RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 APH1AQ96BI3 265 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 MUCL1Q96DR8 90 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 USB1Q9BQ65 265 aaKnown RBP16.37■□□□□ 0.21
CLK1-211ENST00000481641 TRIM2Q9C040 744 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 RLIMQ9NVW2 624 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 TMEM181Q9P2C4 612 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 JMJD1CQ15652 2540 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 A0A1W2PP18 115 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 SHISA9B4DS77 424 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 TMCC2O75069 709 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 SLC22A3O75751 556 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 PGM3O95394 542 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 GKN3PP0CG01 181 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 ETFAP13804 333 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 ANXA11P50995 505 aaKnown RBP16.36■□□□□ 0.21
CLK1-211ENST00000481641 POLR2HP52434 150 aaKnown RBP16.36■□□□□ 0.21
CLK1-211ENST00000481641 MVDP53602 400 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 EPS8Q12929 822 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 PDCD4Q53EL6 469 aaKnown RBP16.36■□□□□ 0.21
CLK1-211ENST00000481641 TIMM23BQ5SRD1 257 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 ATG16L1Q676U5 607 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 VRK2Q86Y07 508 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 CMIPQ8IY22 773 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 MAPK1IP1LQ8NDC0 245 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 OR52E4Q8NGH9 312 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 OR52N5Q8NH56 324 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 GTPBP3Q969Y2 492 aaKnown RBP16.36■□□□□ 0.21
CLK1-211ENST00000481641 OR52B2Q96RD2 323 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 MANSC1Q9H8J5 431 aa16.36■□□□□ 0.21
CLK1-211ENST00000481641 HIVEP2P31629 2446 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 CIB4A0PJX0 185 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 CFAP73A6NFT4 308 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 OR5H1A6NKK0 313 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 CCT8L1PA6NM43 557 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 ABCD4O14678 606 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 NDUFS7O75251 213 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 MRPL33O75394 65 aaKnown RBP16.35■□□□□ 0.21
CLK1-211ENST00000481641 KRT75O95678 551 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 CD8AP01732 235 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 DBIP07108 87 aaKnown RBP16.35■□□□□ 0.21
CLK1-211ENST00000481641 SLC1A3P43003 542 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 HTR3AP46098 478 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 CLK1P49759 484 aaKnown RBP16.35■□□□□ 0.21
CLK1-211ENST00000481641 SLC16A1P53985 500 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 CLEC12BQ2HXU8 276 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 C9orf135Q5VTT2 229 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 ZNF836Q6ZNA1 936 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 GLB1L3Q8NCI6 653 aaPredicted RBP16.35■□□□□ 0.21
CLK1-211ENST00000481641 OR9I1Q8NGQ6 314 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 DDIT4LQ96D03 193 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 AURKBQ96GD4 344 aaPredicted RBP16.35■□□□□ 0.21
CLK1-211ENST00000481641 MAELQ96JY0 434 aaKnown RBP16.35■□□□□ 0.21
CLK1-211ENST00000481641 CISD1Q9NZ45 108 aaKnown RBP16.35■□□□□ 0.21
CLK1-211ENST00000481641 TRAPPC4Q9Y296 219 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 ALPK2Q86TB3 2170 aa16.35■□□□□ 0.21
CLK1-211ENST00000481641 INAFM1C9JVW0 142 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 GPR171O14626 319 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 ZNF208O43345 1280 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 DNPH1O43598 174 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 IL6P05231 212 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 IDO1P14902 403 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 FKBP2P26885 142 aaKnown RBP16.34■□□□□ 0.21
CLK1-211ENST00000481641 CRATP43155 626 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 MAGEA8P43361 318 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 ZNF83P51522 516 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 CDH11P55287 796 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 SLC35A1P78382 337 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 TXNL4AP83876 142 aaKnown RBP16.34■□□□□ 0.21
CLK1-211ENST00000481641 H3F3AP84243 136 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 SPOCK1Q08629 439 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 LRRC74AQ0VAA2 488 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 VEZF1Q14119 521 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 RPS26P11Q5JNZ5 115 aaPredicted RBP16.34■□□□□ 0.21
CLK1-211ENST00000481641 CASP12Q6UXS9 341 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 PEX5LQ8IYB4 626 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 OR52P1PQ8NH57 321 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 VPS33AQ96AX1 596 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 TLCD1Q96CP7 247 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 C1QTNF6Q9BXI9 259 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 NKIRAS1Q9NYS0 192 aa16.34■□□□□ 0.21
CLK1-211ENST00000481641 PLCE1Q9P212 2302 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 RNF223E7ERA6 249 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 SLCO1B7G3V0H7 640 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 FAAHO00519 579 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 ANP32DO95626 131 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 BCHEP06276 602 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 ITGA5P08648 1049 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 ACVR1BP36896 505 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 ACAA2P42765 397 aaKnown RBP16.33■□□□□ 0.2
CLK1-211ENST00000481641 BNIP2Q12982 314 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 GNA13Q14344 377 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 P2RY8Q86VZ1 359 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 PRIMA1Q86XR5 153 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 PIAS4Q8N2W9 510 aaPredicted RBP16.33■□□□□ 0.2
CLK1-211ENST00000481641 CLIP4Q8N3C7 705 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 TRMT61AQ96FX7 289 aaKnown RBP16.33■□□□□ 0.2
CLK1-211ENST00000481641 TRAF4Q9BUZ4 470 aaPredicted RBP16.33■□□□□ 0.2
CLK1-211ENST00000481641 ADAM19Q9H013 955 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 TPT1P8Q9HAU6 139 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 TMBIM4Q9HC24 238 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms