RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 RNF113AO15541 343 aaKnown RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 SEMA4FO95754 770 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 GNA14O95837 355 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 SERPINB2P05120 415 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 LGALS2P05162 132 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 IVLP07476 585 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 CCDC172P0C7W6 258 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 GCFC2P16383 781 aaKnown RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 ZNF10P21506 573 aaPredicted RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 STOMP27105 288 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 GTF2E2P29084 291 aaKnown RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 PRDX3P30048 256 aaKnown RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 UQCRFS1P47985 274 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 BCAP31P51572 246 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 DAOAP59103 153 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 RAB11AP62491 216 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 PAX5Q02548 391 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 IRF8Q02556 426 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 KCNJ11Q14654 390 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 RAB11BQ15907 218 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 C17orf58Q2M2W7 97 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 TWF2Q6IBS0 349 aaKnown RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 HSDL2Q6YN16 418 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 VTCN1Q7Z7D3 282 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 TPRX1Q8N7U7 411 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 OR9A1PQ8NGU1 263 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 PLPPR1Q8TBJ4 325 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 MARCH1Q8TCQ1 289 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 SETD7Q8WTS6 366 aaKnown RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 KIFAP3Q92845 792 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 NODALQ96S42 347 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 REEP4Q9H6H4 257 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 C8orf33Q9H7E9 229 aaPredicted RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 LYRM4Q9HD34 91 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 AMBNQ9NP70 447 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 LZTFL1Q9NQ48 299 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 PNO1Q9NRX1 252 aaKnown RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 WARS2Q9UGM6 360 aaKnown RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 COPS3Q9UNS2 423 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 RHBDD3Q9Y3P4 386 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 CLSPNQ9HAW4 1339 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 IGLV4-3A0A075B6K6 122 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 A0A1B0GUS0 222 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 SULT2B1O00204 365 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 HSD17B6O14756 317 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 NVLO15381 856 aaKnown RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 LATO43561 262 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 OXSR1O95747 527 aaPredicted RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 PLEKP08567 350 aaPredicted RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 UBTFL6P0CB48 400 aaPredicted RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 ZNF26P17031 533 aaPredicted RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 IDSP22304 550 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 U2AF2P26368 475 aaKnown RBP eCLIP4.29□□□□□ -1.722e-11■■□□□ 13.5
COPA-203ENST00000481040 RRM2P31350 389 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 IFNA8P32881 189 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 ELK3P41970 407 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 ALDH3B2P48448 385 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 ARHGDIBP52566 201 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 RPL36AP83881 106 aaKnown RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 SCRN3Q0VDG4 424 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 GRB7Q14451 532 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 ITIH4Q14624 930 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 FASTKD3Q14CZ7 662 aaKnown RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 EIPR1Q53HC9 387 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 CARD16Q5EG05 197 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 SLC22A10Q63ZE4 541 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 CCDC137Q6PK04 289 aaKnown RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 LINC00523Q86TU6 105 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 NUDCD3Q8IVD9 361 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 CSNK1A1LQ8N752 337 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 GPR151Q8TDV0 419 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 MITD1Q8WV92 249 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 HTR3CQ8WXA8 447 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 UFD1Q92890 307 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 ZBED6CLQ96FA7 236 aaPredicted RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 CCDC28BQ9BUN5 200 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 MRPL37Q9BZE1 423 aaKnown RBP4.29□□□□□ -1.72
COPA-203ENST00000481040 CCNB1IP1Q9NPC3 277 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 MTCH1Q9NZJ7 389 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 CACNG5Q9UF02 275 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 RIMS3Q9UJD0 308 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 TMCO1Q9UM00 188 aa4.29□□□□□ -1.72
COPA-203ENST00000481040 LOC100131303A0A0U1RQF7 123 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 MEX3AA1L020 520 aaKnown RBP4.28□□□□□ -1.72
COPA-203ENST00000481040 B4DXG7 233 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 E9PLD3 99 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 SCRG1O75711 98 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 H2AFZP0C0S5 128 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 ANXA13P27216 316 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 HMOX2P30519 316 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 RFX3P48380 749 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 GSK3BP49841 420 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
COPA-203ENST00000481040 EFNA3P52797 238 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 PKNOX1P55347 436 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 RAB10P61026 200 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 OXA1LQ15070 435 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 VWA2Q5GFL6 755 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 LY6G6FQ5SQ64 297 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms