RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PTH2RP49190 550 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 DIO1P49895 249 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 NUDT2P50583 147 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 CSNK2A1P68400 391 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-218ENST00000479554 SLC25A3Q00325 362 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 P2RY6Q15077 328 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 MMEL1Q495T6 779 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 SYT14P1Q58G82 188 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 CLEC9AQ6UXN8 241 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 HMGN2P46Q86SG4 172 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 RCN3Q96D15 328 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 COX4I2Q96KJ9 171 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 TEX37Q96LM6 180 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 PANX1Q96RD7 426 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 GSX2Q9BZM3 304 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 SAP130Q9H0E3 1048 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 CXorf56Q9H5V9 222 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 NGBQ9NPG2 151 aa12.72□□□□□ -0.37
ATG4B-218ENST00000479554 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-218ENST00000479554 DSCAMO60469 2012 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 HEATR5AQ86XA9 2040 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 CCDC154A6NI56 674 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 C9JVG2 144 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 H7C1Q1 480 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 SULT2B1O00204 365 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 BCAS1O75363 584 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 SLC22A3O75751 556 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 CIB2O75838 187 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 TFPIP10646 304 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 RYKP34925 604 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 APOBEC1P41238 236 aaKnown RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 OR3A2P47893 321 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 ANXA11P50995 505 aaKnown RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 UFM1P61960 85 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 CHRNEQ04844 493 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 LTBQ06643 244 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 ITGADQ13349 1161 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 RIPK1Q13546 671 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 CAPRIN1Q14444 709 aaKnown RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 TAB1Q15750 504 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 TMPPEQ6ZT21 453 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 Q6ZT83 130 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 Q71RC1 249 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 RNF130Q86XS8 419 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 FUNDC1Q8IVP5 155 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 DEFB107AQ8IZN7 70 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 ZNF611Q8N823 705 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 PCYOX1LQ8NBM8 494 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 OR9I1Q8NGQ6 314 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 HSD17B8Q92506 261 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 AKAP1Q92667 903 aaKnown RBP eCLIP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 ZNF300Q96RE9 604 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 ZBTB18Q99592 522 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 USB1Q9BQ65 265 aaKnown RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 THTPAQ9BU02 230 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 BDH2Q9BUT1 245 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 POTEKPQ9BYX7 375 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 EXOSC3Q9NQT5 275 aaKnown RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 CTPS2Q9NRF8 586 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 ING1Q9UK53 422 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 PRPF19Q9UMS4 504 aaKnown RBP12.71□□□□□ -0.37
ATG4B-218ENST00000479554 NDUFAF1Q9Y375 327 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 RNF115Q9Y4L5 304 aa12.71□□□□□ -0.37
ATG4B-218ENST00000479554 FAM234BA2RU67 622 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 PRAMEF27A3QJZ7 478 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF724A8MTY0 619 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF814B7Z6K7 855 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 HMGN4O00479 90 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 NR5A2O00482 541 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 CLOCKO15516 846 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 MGRN1O60291 552 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 TMCC2O75069 709 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 PGRP06401 933 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 HEXAP06865 529 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 CD3EP07766 207 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 IL12AP29459 219 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 KCNJ10P78508 379 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 TXNL4AP83876 142 aaKnown RBP12.7□□□□□ -0.38
ATG4B-218ENST00000479554 LRRC74AQ0VAA2 488 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 SYPL1Q16563 259 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 COQ5Q5HYK3 327 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 AP1ARQ63HQ0 302 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 REP15Q6BDI9 236 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 ABLIM2Q6H8Q1 611 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 BLOC1S3Q6QNY0 202 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 HACD2Q6Y1H2 254 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 BHLHA15Q7RTS1 189 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-218ENST00000479554 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
ATG4B-218ENST00000479554 GRINAQ7Z429 371 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 GALNT5Q7Z7M9 940 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 PGAM4Q8N0Y7 254 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 IGFBPL1Q8WX77 278 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-218ENST00000479554 ZG16BQ96DA0 208 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 ZHX1-C8orf76Q96EF9 292 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 TRNT1Q96Q11 434 aaKnown RBP12.7□□□□□ -0.38
ATG4B-218ENST00000479554 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 RASSF4Q9H2L5 321 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms