RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 NPC1O15118 1278 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 UGDHO60701 494 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 FPR3P25089 353 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 RPL3P39023 403 aaKnown RBP12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 MPLP40238 635 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 CDH11P55287 796 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 NFATC2Q13469 925 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 HABP2Q14520 560 aaPredicted RBP12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 INSL4Q14641 139 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 MS4A13Q5J8X5 152 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 ENTPD8Q5MY95 495 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 ADGRF1Q5T601 910 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 ACSM5Q6NUN0 579 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 RHOUQ7L0Q8 258 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 CIR1Q86X95 450 aaPredicted RBP12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 HORMAD2Q8N7B1 307 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 RELL2Q8NC24 303 aaPredicted RBP12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 PHOSPHO1Q8TCT1 267 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 ASZ1Q8WWH4 475 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 SPACA7Q96KW9 195 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 PDFQ9HBH1 243 aa12.18□□□□□ -0.46
CNKSR3-204ENST00000479339 A0A1B0GVC2 190 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 A6NIN4 97 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 KRT33AO76009 404 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 IGF2P01344 180 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 GABRG2P18507 467 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 WASP42768 502 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 UBE2IP63279 158 aaKnown RBP12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 ENPP2Q13822 863 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 DDX39BQ13838 428 aaKnown RBP12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 RNASE12Q5GAN4 147 aaKnown RBP12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 OR2B11Q5JQS5 317 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 SFRP4Q6FHJ7 346 aaPredicted RBP12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 CXorf57Q6NSI4 855 aaKnown RBP12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 REEP3Q6NUK4 255 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 ZNF613Q6PF04 617 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 MISPQ8IVT2 679 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 CFAP206Q8IYR0 622 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 ZFP82Q8N141 532 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 TEX19Q8NA77 164 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 OR4F15Q8NGB8 312 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 THAP4Q8WY91 577 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 EDEM2Q9BV94 578 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 EGLN1Q9GZT9 426 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 KLHL1Q9NR64 748 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 THAP10Q9P2Z0 257 aaPredicted RBP12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 MBD1Q9UIS9 605 aaPredicted RBP12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 RCE1Q9Y256 329 aa12.17□□□□□ -0.46
CNKSR3-204ENST00000479339 A0A1W2PRQ8 180 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 OR14I1A6ND48 311 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 MGAT4DA6NG13 374 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 SFTPCP11686 197 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 HOXD9P28356 352 aaPredicted RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 GCGRP47871 477 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 HCCSP53701 268 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 TBX4P57082 545 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 SIM1P81133 766 aaPredicted RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 MRPS10P82664 201 aaKnown RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 PEA15Q15121 130 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 SLC5A12Q1EHB4 618 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ATP13A5Q4VNC0 1218 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 LIPJQ5W064 366 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 TCTN3Q6NUS6 607 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 KLBQ86Z14 1044 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 TCTEX1D2Q8WW35 142 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 EXOSC8Q96B26 276 aaKnown RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ZNF354BQ96LW1 612 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 PFDN5Q99471 154 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ZNF649Q9BS31 505 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 WRAP53Q9BUR4 548 aaKnown RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 TEX12Q9BXU0 123 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ALX4Q9H161 411 aaPredicted RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ARL15Q9NXU5 204 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 GHRLQ9UBU3 117 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 RPH3AQ9Y2J0 694 aaPredicted RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 GSAPA4D1B5 854 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 RFPL4AA6NLU0 287 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 RHPN2P1A8MT19 583 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 RFPL4AL1F8VTS6 287 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 GABARAPH6UMI1 98 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 INSIG1O15503 277 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 TSPAN3O60637 253 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 RDH16O75452 317 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 SLC25A14O95258 325 aaPredicted RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ABOP16442 354 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 SHC1P29353 583 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 SLC6A12P48065 614 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 SLC11A2P49281 568 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 RAB4BP61018 213 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 PPIAP62937 165 aaKnown RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 CXADRP78310 365 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 BLOC1S1P78537 153 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ZNF345Q14585 488 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ZNF791Q3KP31 576 aaPredicted RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 KLHL26Q53HC5 615 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 LYPLAL1Q5VWZ2 237 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 H3F3CQ6NXT2 135 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms