RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 POM121L12Q8N7R1 296 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 TOMM40LQ969M1 308 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 BIRC7Q96CA5 298 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 NTNG2Q96CW9 530 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 RIT2Q99578 217 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 NLNQ9BYT8 704 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 RAB17Q9H0T7 212 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 LINC00597Q9H2U6 94 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 IL1RL2Q9HB29 575 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 ZNF346Q9UL40 294 aaKnown RBP3.93□□□□□ -1.78
RFC4-212ENST00000479307 RABL2BQ9UNT1 228 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 KLHDC2Q9Y2U9 406 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 SDK2Q58EX2 2172 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 STAB1Q9NY15 2570 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 FN1P02751 2386 aaKnown RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 NUMA1Q14980 2115 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 SHANK1Q9Y566 2161 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 PRRC2CQ9Y520 2896 aaKnown RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 RP1L1Q8IWN7 2480 aaPredicted RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 RPL37AP8A6NKH3 93 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 FAM25EA8MYX2 175 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 SHISA9B4DS77 424 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 EI24O14681 340 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 MCF2LO15068 1137 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 E2F6O75461 281 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 ECDO95905 644 aaPredicted RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 KRT7P08729 469 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 IL4RP24394 825 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 UCP1P25874 307 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 PRDX6P30041 224 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 TUFMP49411 452 aaKnown RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 TPMTP51580 245 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 SLC26A5P58743 744 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 BPIFB3P59826 476 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 TRA2BP62995 288 aaKnown RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 HERVK_113P63132 956 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 ERVK-8P63133 956 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 SRSF6Q13247 344 aaKnown RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 TFDP1Q14186 410 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 TMEM44Q2T9K0 475 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 XKR4Q5GH76 650 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 LINC00242Q5T6M2 205 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 LIPKQ5VXJ0 399 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 IRGCQ6NXR0 463 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 MYPOPQ86VE0 399 aaPredicted RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 GPBP1Q86WP2 473 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 FGFRL1Q8N441 504 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 ARL14Q8N4G2 192 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 ZNF397Q8NF99 534 aaPredicted RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 MRPS31Q92665 395 aaKnown RBP3.92□□□□□ -1.78
RFC4-212ENST00000479307 NCLNQ969V3 563 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 ERVK-6Q9BXR3 956 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 AMBNQ9NP70 447 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 NRN1Q9NPD7 142 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 XPNPEP1Q9NQW7 623 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 TAS2R16Q9NYV7 291 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 IL20RAQ9UHF4 553 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 IKZF3Q9UKT9 509 aa3.92□□□□□ -1.78
RFC4-212ENST00000479307 ESPL1Q14674 2120 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 TRAV19A0A0A6YYK7 116 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 SMIM28A0A1B0GU29 152 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 MSH4O15457 936 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 GALR3O60755 368 aaPredicted RBP3.91□□□□□ -1.78
RFC4-212ENST00000479307 SH3BGRLO75368 114 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 NDUFA7O95182 113 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 NUDT14O95848 222 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 RENP00797 406 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 GP1BAP07359 652 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 PRDX2P32119 198 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 TRIM23P36406 574 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 SGSHP51688 502 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 NAPAP54920 295 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 GMFBP60983 142 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 PSMC5P62195 406 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 RPL10AP62906 217 aaKnown RBP3.91□□□□□ -1.78
RFC4-212ENST00000479307 CD226Q15762 336 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 INAQ16352 499 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 IMMTQ16891 758 aaKnown RBP3.91□□□□□ -1.78
RFC4-212ENST00000479307 ISXQ2M1V0 245 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 PARP6Q2NL67 630 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 DCAF4L1Q3SXM0 396 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 TTC31Q49AM3 519 aaPredicted RBP3.91□□□□□ -1.78
RFC4-212ENST00000479307 RAET1GQ6H3X3 334 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 RFWD3Q6PCD5 774 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 ALKAL1Q6UXT8 129 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 TMEM26Q6ZUK4 368 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 PAQR9Q6ZVX9 377 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 ADCK1Q86TW2 530 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 ARL6IP6Q8N6S5 226 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 ZNF491Q8N8L2 437 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 MINDY2Q8NBR6 621 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 OR4Q3Q8NH05 313 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 OR2L2Q8NH16 312 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 FAM222BQ8WU58 562 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 TAF4BQ92750 862 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 CEP170P1Q96L14 293 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 FAM173AQ9BQD7 235 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 TTYH2Q9BSA4 534 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 NUP58Q9BVL2 599 aa3.91□□□□□ -1.78
RFC4-212ENST00000479307 TEKT3Q9BXF9 490 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms