RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 AP3D1O14617 1153 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 ANKRD28O15084 1053 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 DNPH1O43598 174 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 OR12D1P0DN82 309 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 APOBEC1P41238 236 aaKnown RBP10.5□□□□□ -0.73
GCA-208ENST00000479199 LSM11P83369 360 aaKnown RBP eCLIP10.5□□□□□ -0.73
GCA-208ENST00000479199 CHRNB3Q05901 458 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 FRRS1Q6ZNA5 592 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 ANKRD46Q86W74 232 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 ADGRG3Q86Y34 549 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 C1orf162Q8NEQ5 155 aaPredicted RBP10.5□□□□□ -0.73
GCA-208ENST00000479199 OR4A15Q8NGL6 344 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 RAB8BQ92930 207 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 C3orf49Q96BT1 292 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 TUBGCP3Q96CW5 907 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 FBXO17Q96EF6 278 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 SORCS2Q96PQ0 1159 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 FKRPQ9H9S5 495 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 PPCSQ9HAB8 311 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 SLC7A10Q9NS82 523 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 EXD2Q9NVH0 621 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 ZDHHC2Q9UIJ5 367 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 KCNS2Q9ULS6 477 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 SLC35A3Q9Y2D2 325 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 SLC9A8Q9Y2E8 581 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 AMDHD2Q9Y303 409 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 WDR45Q9Y484 360 aa10.5□□□□□ -0.73
GCA-208ENST00000479199 IGHV4-61A0A0C4DH41 118 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 TMEM72A0PK05 275 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 SPAG7O75391 227 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 C1QCP02747 245 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 APOBEC3AP31941 199 aaPredicted RBP10.49□□□□□ -0.73
GCA-208ENST00000479199 MAGEA8P43361 318 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 GZMKP49863 264 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 PDLIM4P50479 330 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 CLDN8P56748 225 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 CARTPTQ16568 116 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 FAM120AOSQ5T036 256 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 TSPO2Q5TGU0 170 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 FAM166AQ6J272 317 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 C17orf78Q8N4C9 275 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 ANKS4BQ8N8V4 417 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 MIPOL1Q8TD10 442 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 ROPN1LQ96C74 230 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 ZG16BQ96DA0 208 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 MSI2Q96DH6 328 aaKnown RBP10.49□□□□□ -0.73
GCA-208ENST00000479199 PIMREGQ9BSJ6 248 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 TMEM181Q9P2C4 612 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 UPB1Q9UBR1 384 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 DCTN4Q9UJW0 460 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 MOKQ9UQ07 419 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 FKBP7Q9Y680 259 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 PMF1-BGLAPU3KQ54 211 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 SVEP1Q4LDE5 3571 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 DYSFO75923 2080 aa10.49□□□□□ -0.73
GCA-208ENST00000479199 TMED7-TICAM2A0A0A6YYA0 188 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 LOC100289279A0A1B0GTE1 492 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 ZC3H12DA2A288 527 aaKnown RBP10.48□□□□□ -0.73
GCA-208ENST00000479199 PRAMEF27A3QJZ7 478 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 RNASET2O00584 256 aaKnown RBP10.48□□□□□ -0.73
GCA-208ENST00000479199 IMPDH2P12268 514 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 BMP4P12644 408 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 APEHP13798 732 aaKnown RBP10.48□□□□□ -0.73
GCA-208ENST00000479199 CDH2P19022 906 aaPredicted RBP10.48□□□□□ -0.73
GCA-208ENST00000479199 NR4A2P43354 598 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 IDH2P48735 452 aaKnown RBP10.48□□□□□ -0.73
GCA-208ENST00000479199 H3F3AP84243 136 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 SWI5Q1ZZU3 235 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 MST1LQ2TV78 715 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 HIKESHIQ53FT3 197 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 ATAD3BQ5T9A4 648 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 HOMEZQ8IX15 550 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 ARFGAP2Q8N6H7 521 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 TCP10LQ8TDR4 215 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 XAGE5Q8WWM1 108 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 CNOT9Q92600 299 aaKnown RBP10.48□□□□□ -0.73
GCA-208ENST00000479199 PPP1R36Q96LQ0 422 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 EXOSC3Q9NQT5 275 aaKnown RBP10.48□□□□□ -0.73
GCA-208ENST00000479199 NOP53Q9NZM5 478 aaKnown RBP10.48□□□□□ -0.73
GCA-208ENST00000479199 OSGIN1Q9UJX0 560 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 TMED7Q9Y3B3 224 aa10.48□□□□□ -0.73
GCA-208ENST00000479199 TLDC2A0PJX2 215 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 KLF11O14901 512 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 CPSF4O95639 269 aaKnown RBP10.47□□□□□ -0.73
GCA-208ENST00000479199 THBS2P35442 1172 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 CLK1P49759 484 aaKnown RBP10.47□□□□□ -0.73
GCA-208ENST00000479199 KHKP50053 298 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 PRPS1P60891 318 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 SNRPD2P62316 118 aaKnown RBP10.47□□□□□ -0.73
GCA-208ENST00000479199 SLC35A1P78382 337 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 KCNJ10P78508 379 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 HPCAP84074 193 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 LGALS3BPQ08380 585 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 SLC17A1Q14916 467 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 PDCD2Q16342 344 aaPredicted RBP10.47□□□□□ -0.73
GCA-208ENST00000479199 GPAT3Q53EU6 434 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 SAXO2Q658L1 398 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 KLHL24Q6TFL4 600 aa10.47□□□□□ -0.73
GCA-208ENST00000479199 SLC46A3Q7Z3Q1 461 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms