RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FREM1Q5H8C1 2179 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 DCHS2Q6V1P9 2916 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 ZNF724A8MTY0 619 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 A8MVM7 634 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 SULT2B1O00204 365 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 TPST1O60507 370 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 NPIPB7O75200 414 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 OPN1LWP04000 364 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 PNMTP11086 282 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 PRG2P13727 222 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 ENPP1P22413 925 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 CXCR1P25024 350 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 CBX1P83916 185 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 MYBPHQ13203 477 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 NRF1Q16656 503 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 DUSP7Q16829 419 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 FCRLAQ7L513 359 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 ATG4DQ86TL0 474 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-217ENST00000479161 GCNT2Q8N0V5 402 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 C3orf49Q96BT1 292 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 ZHX1-C8orf76Q96EF9 292 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 OR5B2Q96R09 309 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 ARHGDIGQ99819 225 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 TRIM8Q9BZR9 551 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 PCDHAC1Q9H158 963 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 PIF1Q9H611 641 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 ABCD2Q9UBJ2 740 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 SLC13A4Q9UKG4 626 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 ADAM21Q9UKJ8 722 aa13.82□□□□□ -0.2
C9orf3-217ENST00000479161 APCP25054 2843 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 IGKV3D-15A0A087WSY6 115 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 A0A1W2PNR3 127 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 ELOVL7A1L3X0 281 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 TMEM229AB2RXF0 380 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 AIM2O14862 343 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 GOSR1O95249 250 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 YES1P07947 543 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 SLC16A1P53985 500 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 CTBP2P56545 445 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 SLC35A1P78382 337 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 GKAP1Q5VSY0 366 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-217ENST00000479161 ULK3Q6PHR2 472 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 MEX3BQ6ZN04 569 aaKnown RBP13.81□□□□□ -0.2
C9orf3-217ENST00000479161 BTLAQ7Z6A9 289 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 MCEMP1Q8IX19 187 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 OR2T12Q8NG77 320 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 SLC38A4Q969I6 547 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 MARVELD3Q96A59 401 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 ARL5BQ96KC2 179 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 POLR2J2Q9GZM3 115 aaKnown RBP13.81□□□□□ -0.2
C9orf3-217ENST00000479161 POLR2J3Q9H1A7 115 aaKnown RBP13.81□□□□□ -0.2
C9orf3-217ENST00000479161 FANCFQ9NPI8 374 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 CMTM6Q9NX76 183 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 KLHL13Q9P2N7 655 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 BAG5Q9UL15 447 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 ABCA12Q86UK0 2595 aa13.81□□□□□ -0.2
C9orf3-217ENST00000479161 TMEM72A0PK05 275 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 SMAD9O15198 467 aaKnown RBP13.8□□□□□ -0.2
C9orf3-217ENST00000479161 CNOT4O95628 575 aaKnown RBP13.8□□□□□ -0.2
C9orf3-217ENST00000479161 PLGP00747 810 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-217ENST00000479161 TFPIP10646 304 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 CD247P20963 164 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 AQP1P29972 269 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 SSTR2P30874 369 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 KDELR2P33947 212 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 MNAT1P51948 309 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 CRYBA2P53672 197 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 RGS8P57771 180 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-217ENST00000479161 KRT72Q14CN4 511 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 SPATS1Q496A3 300 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 ZNF787Q6DD87 383 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 ABLIM2Q6H8Q1 611 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 ZNF613Q6PF04 617 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 PAQR6Q6TCH4 344 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 PLXDC2Q6UX71 529 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 COMTD1Q86VU5 262 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 RANBP3LQ86VV4 465 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-217ENST00000479161 MICU2Q8IYU8 434 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 CADM2Q8N3J6 435 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 CNEP1R1Q8N9A8 125 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 ATP6V1C2Q8NEY4 427 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 GPR32P1Q8NGA4 272 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 OR52E4Q8NGH9 312 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 OR6S1Q8NH40 331 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 TAMM41Q96BW9 452 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 SLC47A1Q96FL8 570 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 RBM24Q9BX46 236 aaKnown RBP13.8□□□□□ -0.2
C9orf3-217ENST00000479161 OR10A4Q9H209 315 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 TMEM27Q9HBJ8 222 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 ABCA4P78363 2273 aa13.8□□□□□ -0.2
C9orf3-217ENST00000479161 EEF1E1-BLOC1S5C9J1V9 151 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 GPR171O14626 319 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 EEF1E1O43324 174 aaKnown RBP13.79□□□□□ -0.2
C9orf3-217ENST00000479161 OR2T1O43869 369 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 GPIP06744 558 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 FESP07332 822 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 AGTR1P30556 359 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 NUDT2P50583 147 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 NCALDP61601 193 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 TMEM201Q5SNT2 666 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms