RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 DHFR2Q86XF0 187 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 MISPQ8IVT2 679 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 PM20D2Q8IYS1 436 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 TMEM171Q8WVE6 324 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 PMM1Q92871 262 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 ASB9Q96DX5 294 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 PIK3IP1Q96FE7 263 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 RSRC1Q96IZ7 334 aaKnown RBP13.02□□□□□ -0.33
USP11-207ENST00000478596 PRDM14Q9GZV8 571 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 SAP130Q9H0E3 1048 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 MMADHCQ9H3L0 296 aaPredicted RBP13.02□□□□□ -0.33
USP11-207ENST00000478596 CD300AQ9UGN4 299 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 DKKL1Q9UK85 242 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.33
USP11-207ENST00000478596 SAMD4AQ9UPU9 718 aaKnown RBP13.02□□□□□ -0.33
USP11-207ENST00000478596 A0A1W2PQD3 144 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 ALG1L2C9J202 215 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 M0QX08 132 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 SNX4O95219 450 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 GUSBP08236 651 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 RFPL3SP0C7P2 107 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 CRYGSP22914 178 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 KDELR2P33947 212 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 ZNF41P51814 821 aaPredicted RBP13.01□□□□□ -0.33
USP11-207ENST00000478596 PCBP3P57721 371 aaKnown RBP13.01□□□□□ -0.33
USP11-207ENST00000478596 RGS8P57771 180 aaPredicted RBP13.01□□□□□ -0.33
USP11-207ENST00000478596 CRYZQ08257 329 aaKnown RBP13.01□□□□□ -0.33
USP11-207ENST00000478596 FGFBP1Q14512 234 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 MAPK11Q15759 364 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 ETFDHQ16134 617 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 NDUFAF6Q330K2 333 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 OR5M10Q6IEU7 315 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 FKBP9P1Q75LS8 142 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 SPATA24Q86W54 205 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 BHLHE22Q8NFJ8 381 aaPredicted RBP13.01□□□□□ -0.33
USP11-207ENST00000478596 OR1J4Q8NGS1 313 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 OIT3Q8WWZ8 545 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 TAMM41Q96BW9 452 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 TIMP4Q99727 224 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 ZNF226Q9NYT6 803 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 BAG5Q9UL15 447 aa13.01□□□□□ -0.33
USP11-207ENST00000478596 RAI1Q7Z5J4 1906 aaPredicted RBP13□□□□□ -0.33
USP11-207ENST00000478596 CLDN24A6NM45 220 aa13□□□□□ -0.33
USP11-207ENST00000478596 ZNF264O43296 627 aa13□□□□□ -0.33
USP11-207ENST00000478596 FADS1O60427 444 aa13□□□□□ -0.33
USP11-207ENST00000478596 ATP6V1B2P21281 511 aa13□□□□□ -0.33
USP11-207ENST00000478596 RPS4Y1P22090 263 aaKnown RBP13□□□□□ -0.33
USP11-207ENST00000478596 TCEA1P23193 301 aaKnown RBP13□□□□□ -0.33
USP11-207ENST00000478596 GDF1P27539 372 aa13□□□□□ -0.33
USP11-207ENST00000478596 PRKAR1BP31321 381 aa13□□□□□ -0.33
USP11-207ENST00000478596 PCYT1AP49585 367 aa13□□□□□ -0.33
USP11-207ENST00000478596 KCNJ10P78508 379 aa13□□□□□ -0.33
USP11-207ENST00000478596 C17orf67Q0P5P2 114 aa13□□□□□ -0.33
USP11-207ENST00000478596 TRIM25Q14258 630 aaKnown RBP13□□□□□ -0.33
USP11-207ENST00000478596 CD226Q15762 336 aa13□□□□□ -0.33
USP11-207ENST00000478596 MAPK14Q16539 360 aa13□□□□□ -0.33
USP11-207ENST00000478596 MTX3Q5HYI7 312 aa13□□□□□ -0.33
USP11-207ENST00000478596 RNF220Q5VTB9 566 aa13□□□□□ -0.33
USP11-207ENST00000478596 CCDC80Q76M96 950 aa13□□□□□ -0.33
USP11-207ENST00000478596 ASRGL1Q7L266 308 aa13□□□□□ -0.33
USP11-207ENST00000478596 LUZP2Q86TE4 346 aa13□□□□□ -0.33
USP11-207ENST00000478596 CMIPQ8IY22 773 aa13□□□□□ -0.33
USP11-207ENST00000478596 TOR1AIP2Q8NFQ8 470 aa13□□□□□ -0.33
USP11-207ENST00000478596 B4GALNT2Q8NHY0 566 aa13□□□□□ -0.33
USP11-207ENST00000478596 VANGL1Q8TAA9 524 aaPredicted RBP13□□□□□ -0.33
USP11-207ENST00000478596 HSH2DQ96JZ2 352 aa13□□□□□ -0.33
USP11-207ENST00000478596 SFXN3Q9BWM7 321 aa13□□□□□ -0.33
USP11-207ENST00000478596 PINK1Q9BXM7 581 aa13□□□□□ -0.33
USP11-207ENST00000478596 ANGPTL4Q9BY76 406 aa13□□□□□ -0.33
USP11-207ENST00000478596 PTGES2Q9H7Z7 377 aa13□□□□□ -0.33
USP11-207ENST00000478596 CALHM2Q9HA72 323 aa13□□□□□ -0.33
USP11-207ENST00000478596 ZFP64Q9NPA5 681 aa13□□□□□ -0.33
USP11-207ENST00000478596 TMEM160Q9NX00 188 aa13□□□□□ -0.33
USP11-207ENST00000478596 ACTR3BQ9P1U1 418 aa13□□□□□ -0.33
USP11-207ENST00000478596 SLC9A8Q9Y2E8 581 aa13□□□□□ -0.33
USP11-207ENST00000478596 CARD8Q9Y2G2 431 aa13□□□□□ -0.33
USP11-207ENST00000478596 DSCAMO60469 2012 aa13□□□□□ -0.33
USP11-207ENST00000478596 NPIPB9F8W1W9 429 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 MFN2O95140 757 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 TMIGD3P0DMS9 266 aaPredicted RBP12.99□□□□□ -0.33
USP11-207ENST00000478596 RYKP34925 604 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 ERFP50548 548 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 ZNF117Q03924 483 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 ZSWIM7Q19AV6 140 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 KLHL26Q53HC5 615 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 DHRS4L2Q6PKH6 230 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 RANBP3LQ86VV4 465 aaPredicted RBP12.99□□□□□ -0.33
USP11-207ENST00000478596 ZNF440Q8IYI8 595 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 ZNF563Q8TA94 476 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 RNF217Q8TC41 542 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 ZG16BQ96DA0 208 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 TMEM41AQ96HV5 264 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 WFIKKN1Q96NZ8 548 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 HS3ST6Q96QI5 342 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 TRIB1Q96RU8 372 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 BEX2Q9BXY8 128 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 SH2D2AQ9NP31 389 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 RPS6KB2Q9UBS0 482 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 SLC7A8Q9UHI5 535 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms