RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ARHGDIGQ99819 225 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 KCTD14Q9BQ13 255 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-222ENST00000478095 ADAM19Q9H013 955 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 ALG2Q9H553 416 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 KCNJ16Q9NPI9 418 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 TIGARQ9NQ88 270 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 PAQR5Q9NXK6 330 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-222ENST00000478095 ABCD2Q9UBJ2 740 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 RPS6KB2Q9UBS0 482 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 TESQ9UGI8 421 aaKnown RBP9.19□□□□□ -0.94
HDAC6-222ENST00000478095 KLF2Q9Y5W3 355 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-222ENST00000478095 CPSF4LA6NMK7 179 aaKnown RBP9.18□□□□□ -0.94
HDAC6-222ENST00000478095 SULT2B1O00204 365 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 SYT5O00445 386 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 CXCR6O00574 342 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 SMAD9O15198 467 aaKnown RBP9.18□□□□□ -0.94
HDAC6-222ENST00000478095 GSTA4O15217 222 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 TNFSF13O75888 250 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 SMNDC1O75940 238 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■□□□ 12.9
HDAC6-222ENST00000478095 LGI1O95970 557 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 PLGP00747 810 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-222ENST00000478095 FESP07332 822 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 TCN1P20061 433 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-222ENST00000478095 KDELR2P33947 212 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 OPRM1P35372 400 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 OR2B6P58173 313 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 TFF3Q07654 80 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 SNTB1Q13884 538 aaKnown RBP9.18□□□□□ -0.94
HDAC6-222ENST00000478095 KRT72Q14CN4 511 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 OR1Q1Q15612 314 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 NPTX1Q15818 432 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 NRF1Q16656 503 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 SLC25A35Q3KQZ1 300 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 CYBRD1Q53TN4 286 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 OR2A2Q6IF42 318 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 MYO7BQ6PIF6 2116 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 TMPPEQ6ZT21 453 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 FCRLAQ7L513 359 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 LUZP2Q86TE4 346 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 ATG4DQ86TL0 474 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-222ENST00000478095 RANBP3LQ86VV4 465 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-222ENST00000478095 P3H2Q8IVL5 708 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 MCEMP1Q8IX19 187 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 FAM156AQ8NDB6 213 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 RNF128Q8TEB7 428 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 PROX1Q92786 737 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 DDIT4LQ96D03 193 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 TPD52L3Q96J77 140 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 ZFP3Q96NJ6 502 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 MCHR1Q99705 422 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 SFXN3Q9BWM7 321 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 TMEM181Q9P2C4 612 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF629Q9UEG4 869 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-222ENST00000478095 EGFL7Q9UHF1 273 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 AP3M1Q9Y2T2 418 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 SH3GLB1Q9Y371 365 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 HECTD1Q9ULT8 2610 aa9.18□□□□□ -0.94
HDAC6-222ENST00000478095 DOPEY2Q9Y3R5 2298 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 DIDO1Q9BTC0 2240 aaKnown RBP9.17□□□□□ -0.94
HDAC6-222ENST00000478095 KIAA1549Q9HCM3 1950 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 USP9YO00507 2555 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-222ENST00000478095 ELOA3DA6NLF2 546 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-222ENST00000478095 TMEM229AB2RXF0 380 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF208O43345 1280 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF682O95780 498 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 IL18BPO95998 194 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 IFNA14P01570 189 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 C8BP07358 591 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 IMPDH2P12268 514 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 UQCRC1P31930 480 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 KIR2DL2P43627 348 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-222ENST00000478095 OR1E2P47887 323 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 RAC3P60763 192 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 CSNK2A1P68400 391 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-222ENST00000478095 ELOA3BQ3SY89 546 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 ALG10BQ5I7T1 473 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-222ENST00000478095 C16orf89Q6UX73 402 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 CARM1Q86X55 608 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 DEFB107AQ8IZN7 70 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 PGAM4Q8N0Y7 254 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 LSMEM1Q8N8F7 131 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 ELOA3Q8NG57 546 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 RASSF5Q8WWW0 418 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 NSL1Q96IY1 281 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 CDRT15Q96T59 188 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF559Q9BR84 538 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 TRIM2Q9C040 744 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 OPN3Q9H1Y3 402 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-222ENST00000478095 TMEM27Q9HBJ8 222 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 KLHL13Q9P2N7 655 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 BAG5Q9UL15 447 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 HDGFL3Q9Y3E1 203 aa9.17□□□□□ -0.94
HDAC6-222ENST00000478095 SPTAN1Q13813 2472 aaKnown RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 FREM3P0C091 2139 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 GTF3C1Q12789 2109 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 IGKV1D-42A0A075B6H8 117 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 A0A0B4J2E0 115 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 A0A1B0GX12 115 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 A8MVM7 634 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms