RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 H7C417 338 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 PHF1O43189 567 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-211ENST00000477890 DNPH1O43598 174 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 GUSBP08236 651 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 CREB1P16220 341 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 IDH2P48735 452 aaKnown RBP10.31□□□□□ -0.76
CPSF7-211ENST00000477890 CLK1P49759 484 aaKnown RBP10.31□□□□□ -0.76
CPSF7-211ENST00000477890 KHKP50053 298 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 KCNJ10P78508 379 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 HPCAP84074 193 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 VLDLRP98155 873 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 IFFO1Q0D2I5 559 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 SMU1Q2TAY7 513 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 GPAT3Q53EU6 434 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 SAXO2Q658L1 398 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 EMBQ6PCB8 327 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 WDR31Q8NA23 367 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 VPS37AQ8NEZ2 397 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 NANOS1Q8WY41 292 aaKnown RBP10.31□□□□□ -0.76
CPSF7-211ENST00000477890 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.31□□□□□ -0.76
CPSF7-211ENST00000477890 DDIT4LQ96D03 193 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 BEX2Q9BXY8 128 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 SAP130Q9H0E3 1048 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 AKTIPQ9H8T0 292 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 FKRPQ9H9S5 495 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 EXOSC3Q9NQT5 275 aaKnown RBP10.31□□□□□ -0.76
CPSF7-211ENST00000477890 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-211ENST00000477890 TMEM181Q9P2C4 612 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 LGALS13Q9UHV8 139 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 FLVCR1Q9Y5Y0 555 aa10.31□□□□□ -0.76
CPSF7-211ENST00000477890 TMED7-TICAM2A0A0A6YYA0 188 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 PRSS51A0A1B0GVH4 220 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 TMEM72A0PK05 275 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 PDLIM1O00151 329 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 AP3D1O14617 1153 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 ITM2AO43736 263 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 SCN2BO60939 215 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 NUDT17P0C025 328 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 BMP4P12644 408 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 ZNF16P17020 682 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-211ENST00000477890 CHI3L1P36222 383 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-211ENST00000477890 HTR3AP46098 478 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 EFNA4P52798 201 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 PHC1P78364 1004 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 SLC35A1P78382 337 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 H3F3AP84243 136 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 PLAURQ03405 335 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 CHRNB3Q05901 458 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 ANXA8L1Q5VT79 327 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 NUDCD3Q8IVD9 361 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 ZNF781Q8N8C0 355 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 C10orf105Q8TEF2 133 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 CNOT9Q92600 299 aaKnown RBP10.3□□□□□ -0.76
CPSF7-211ENST00000477890 NEURL3Q96EH8 262 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 PKNOX2Q96KN3 472 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 ZIM3Q96PE6 472 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 SLC35A5Q9BS91 424 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 NAA11Q9BSU3 229 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-211ENST00000477890 AMBRA1Q9C0C7 1298 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 SLC17A5Q9NRA2 495 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 SLC7A10Q9NS82 523 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 PARPBPQ9NWS1 579 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 MARCOQ9UEW3 520 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-211ENST00000477890 DCTN4Q9UJW0 460 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 TRAPPC4Q9Y296 219 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 SLC9A8Q9Y2E8 581 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 AMDHD2Q9Y303 409 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 TMED7Q9Y3B3 224 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 PMF1-BGLAPU3KQ54 211 aa10.3□□□□□ -0.76
CPSF7-211ENST00000477890 ARFGEF3Q5TH69 2177 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 PRAMEF27A3QJZ7 478 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 WDR91A4D1P6 747 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 ATP6V1G2-DDX39BF2Z307 99 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 HMGN4O00479 90 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 EIF1BO60739 113 aaKnown RBP10.29□□□□□ -0.76
CPSF7-211ENST00000477890 LY6HO94772 140 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 CSF3P09919 207 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 IGHV4-31P0DP07 118 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 IMPDH2P12268 514 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 USF1P22415 310 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-211ENST00000477890 TACR3P29371 465 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 APOBEC3AP31941 199 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-211ENST00000477890 ETV4P43268 484 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 POLR2HP52434 150 aaKnown RBP10.29□□□□□ -0.76
CPSF7-211ENST00000477890 SLC25A3Q00325 362 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 TGFBR3Q03167 851 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 CASP8Q14790 479 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 SPANXN4Q5MJ08 99 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 TSPO2Q5TGU0 170 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 AP1ARQ63HQ0 302 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 C17orf78Q8N4C9 275 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 C1orf162Q8NEQ5 155 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-211ENST00000477890 PROX1Q92786 737 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 PMM1Q92871 262 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 TESCQ96BS2 214 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 SHARPINQ9H0F6 387 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 TMEM160Q9NX00 188 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 OSGIN1Q9UJX0 560 aa10.29□□□□□ -0.76
CPSF7-211ENST00000477890 MALRD1Q5VYJ5 2156 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms