RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 M0R3H8 397 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 SULT2B1O00204 365 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 DVL2O14641 736 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 PMS2P2O95744 297 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 OPN1LWP04000 364 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 TMIGD3P0DMS9 266 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-205ENST00000477508 CTSSP25774 331 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 SHC1P29353 583 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 IFNA8P32881 189 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 OPRM1P35372 400 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 HOXC5Q00444 222 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 RNPS1Q15287 305 aaKnown RBP11.77□□□□□ -0.53
TOP3A-205ENST00000477508 OR1Q1Q15612 314 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 ELOA3BQ3SY89 546 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 DNAL1Q4LDG9 190 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 RINLQ6ZS11 566 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 CBLL1Q75N03 491 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 CARM1Q86X55 608 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 RNF148Q8N7C7 305 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 C9orf106Q8NAJ2 232 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 ELOA3Q8NG57 546 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 FNDC9Q8TBE3 224 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 POP5Q969H6 163 aaKnown RBP11.77□□□□□ -0.53
TOP3A-205ENST00000477508 SLC38A4Q969I6 547 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 ZNF845Q96IR2 970 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-205ENST00000477508 TPD52L3Q96J77 140 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 SFXN3Q9BWM7 321 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 MUC13Q9H3R2 512 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 RNF122Q9H9V4 155 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 GP6Q9HCN6 339 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 TAS2R1Q9NYW7 299 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 Q9UFV3 132 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 EGFL7Q9UHF1 273 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 SAMD4AQ9UPU9 718 aaKnown RBP11.77□□□□□ -0.53
TOP3A-205ENST00000477508 SNX13Q9Y5W8 968 aa11.77□□□□□ -0.53
TOP3A-205ENST00000477508 A0A0B4J2E0 115 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 A0A1B0GX12 115 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 A0A1W2PNR3 127 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 TMEM72A0PK05 275 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 TRAPPC13A5PLN9 417 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 GYG2O15488 501 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 EIF1BO60739 113 aaKnown RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 TOXO94900 526 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 CLDN14O95500 239 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 ZNF682O95780 498 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 TGM6O95932 706 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 SERPINA1P01009 418 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 TCN1P20061 433 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 CCNA2P20248 432 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 ENPP1P22413 925 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 HTR2AP28223 471 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 DIO1P49895 249 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 SLC35A1P78382 337 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 MYBPHQ13203 477 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 ZNF239Q16600 458 aaKnown RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 SLC25A35Q3KQZ1 300 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 IFI44LQ53G44 452 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 ENTPD8Q5MY95 495 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 MCEMP1Q8IX19 187 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 VANGL1Q8TAA9 524 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 GEMIN6Q8WXD5 167 aaKnown RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 LRRC46Q96FV0 321 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 MPP4Q96JB8 637 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 TACO1Q9BSH4 297 aaKnown RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 COQ10BQ9H8M1 238 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 KCNJ16Q9NPI9 418 aa11.76□□□□□ -0.53
TOP3A-205ENST00000477508 DCAF13Q9NV06 445 aaKnown RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 GMPR2Q9P2T1 348 aaKnown RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 KLF2Q9Y5W3 355 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 SPTAN1Q13813 2472 aaKnown RBP11.76□□□□□ -0.53
TOP3A-205ENST00000477508 MED12LQ86YW9 2145 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 A0A087WUJ7 227 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 TMEM229AB2RXF0 380 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 CHP2O43745 196 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 OR2T1O43869 369 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 TPST2O60704 377 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 PLGP00747 810 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-205ENST00000477508 IFNW1P05000 195 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 GPIP06744 558 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 THRBP10828 461 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 NCK1P16333 377 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 IDUAP35475 653 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 AGFG1P52594 562 aaKnown RBP11.75□□□□□ -0.53
TOP3A-205ENST00000477508 CDH12P55289 794 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 PRSS12P56730 875 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 BNIP1Q12981 228 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 CEACAM7Q14002 265 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 NPTX1Q15818 432 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 PPP4R4Q6NUP7 873 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 NCCRP1Q6ZVX7 275 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-205ENST00000477508 FKBP9P1Q75LS8 142 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 CCDC71Q8IV32 467 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-205ENST00000477508 OR4D11Q8NGI4 311 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 ADAMTS16Q8TE57 1224 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 RNF128Q8TEB7 428 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 GMPPAQ96IJ6 420 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-205ENST00000477508 ARL5BQ96KC2 179 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 NSMCE2Q96MF7 247 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 PSMG3-AS1Q96PY0 264 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 EPYCQ99645 322 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms